RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 MYCLP1P12525 358 aaPredicted RBP19.05■□□□□ 0.64
DDX55-211ENST00000544429 DGKAP23743 735 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 RPL22P35268 128 aaKnown RBP19.05■□□□□ 0.64
DDX55-211ENST00000544429 KCNJ1P48048 391 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 CDK3Q00526 305 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 ALG11Q2TAA5 492 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 FAXCQ5TGI0 409 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 KCTD16Q68DU8 428 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 NYAP1Q6ZVC0 841 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 PRUNE1Q86TP1 453 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 HEATR4Q86WZ0 1026 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 C17orf53Q8N3J3 647 aaPredicted RBP19.05■□□□□ 0.64
DDX55-211ENST00000544429 GPR26Q8NDV2 337 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 COX14Q96I36 57 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 NAPGQ99747 312 aaPredicted RBP19.05■□□□□ 0.64
DDX55-211ENST00000544429 TBL1YQ9BQ87 522 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 RIOK2Q9BVS4 552 aaKnown RBP19.05■□□□□ 0.64
DDX55-211ENST00000544429 LRRC40Q9H9A6 602 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 ETNK1Q9HBU6 452 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 DNAJC28Q9NX36 388 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 IL17CQ9P0M4 197 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 PAK5Q9P286 719 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 FEZ2Q9UHY8 353 aaPredicted RBP19.05■□□□□ 0.64
DDX55-211ENST00000544429 CNOT6Q9ULM6 557 aaKnown RBP19.05■□□□□ 0.64
DDX55-211ENST00000544429 BTBD3Q9Y2F9 522 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 DGKBQ9Y6T7 804 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 GOLGA6CA6NDK9 693 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 GOLGA6BA6NDN3 693 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 ERI2A8K979 691 aaKnown RBP19.04■□□□□ 0.64
DDX55-211ENST00000544429 TNFRSF10CO14798 259 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 PSMD3O43242 534 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 USP12O75317 370 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 SUN1O94901 812 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 ZSCAN5DPP0CG00 497 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 GOLGA6DP0CG33 693 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 CEACAM1P13688 526 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 BPIP17213 487 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 HTR1BP28222 390 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 FDFT1P37268 417 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 GRK6P43250 576 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 TNNT3P45378 269 aaPredicted RBP19.04■□□□□ 0.64
DDX55-211ENST00000544429 HNRNPKP61978 463 aaKnown RBP eCLIP19.04■□□□□ 0.64
DDX55-211ENST00000544429 SUZ12Q15022 739 aaKnown RBP19.04■□□□□ 0.64
DDX55-211ENST00000544429 ZNF542PQ5EBM4 170 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 C4orf22Q6V702 233 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 GATAD2AQ86YP4 633 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 CREG2Q8IUH2 290 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 PDCD7Q8N8D1 485 aaKnown RBP19.04■□□□□ 0.64
DDX55-211ENST00000544429 DTX3LQ8TDB6 740 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 WDR92Q96MX6 357 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 CAMK1GQ96NX5 476 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 PLEKHG4BQ96PX9 1271 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 C19orf43Q9BQ61 176 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 APOL2Q9BQE5 337 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 AP1M1Q9BXS5 423 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 FRMD8Q9BZ67 464 aaPredicted RBP19.04■□□□□ 0.64
DDX55-211ENST00000544429 GPR63Q9BZJ6 419 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 FAM83DQ9H4H8 585 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 FGF22Q9HCT0 170 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 RAD18Q9NS91 495 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 UCKL1Q9NWZ5 548 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 GOLGA6AQ9NYA3 693 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 NEU2Q9Y3R4 380 aa19.04■□□□□ 0.64
DDX55-211ENST00000544429 FADS2P1A8MWK0 482 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 CACNB4O00305 520 aaPredicted RBP19.03■□□□□ 0.64
DDX55-211ENST00000544429 KCNK5O95279 499 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 JUNDP17535 347 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 HK3P52790 923 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 SPARCL1Q14515 664 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 RAET1GQ6H3X3 334 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 GLT6D1Q7Z4J2 308 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 GLRX5Q86SX6 157 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 PHACTR4Q8IZ21 702 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 CCDC89Q8N998 374 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 ZNF548Q8NEK5 533 aaPredicted RBP19.03■□□□□ 0.64
DDX55-211ENST00000544429 DEFB124Q8NES8 71 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 ATL2Q8NHH9 583 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 OR1E3Q8WZA6 343 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 SCARF2Q96GP6 870 aaPredicted RBP19.03■□□□□ 0.64
DDX55-211ENST00000544429 TCEAL2Q9H3H9 227 aaPredicted RBP19.03■□□□□ 0.64
DDX55-211ENST00000544429 PHPT1Q9NRX4 125 aaPredicted RBP19.03■□□□□ 0.64
DDX55-211ENST00000544429 SLC17A4Q9Y2C5 497 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 CSNK1G3Q9Y6M4 447 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 PLXNB3Q9ULL4 1909 aa19.03■□□□□ 0.64
DDX55-211ENST00000544429 SPTBN2O15020 2390 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 CTAGE9A4FU28 777 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 PDE2AO00408 941 aaPredicted RBP19.02■□□□□ 0.64
DDX55-211ENST00000544429 SDC3O75056 442 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 FUCA1P04066 466 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 CEACAM5P06731 702 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 KELP23276 732 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 COILP38432 576 aaPredicted RBP19.02■□□□□ 0.64
DDX55-211ENST00000544429 GPR1P46091 355 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 SRP54P61011 504 aaKnown RBP19.02■□□□□ 0.64
DDX55-211ENST00000544429 ETF1P62495 437 aaKnown RBP19.02■□□□□ 0.64
DDX55-211ENST00000544429 PPARDQ03181 441 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 TAF1AQ15573 450 aaPredicted RBP19.02■□□□□ 0.64
DDX55-211ENST00000544429 PDPK2PQ6A1A2 396 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 ENPP7Q6UWV6 458 aa19.02■□□□□ 0.64
DDX55-211ENST00000544429 RBFAQ8N0V3 343 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms