RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 RFWD2Q8NHY2 731 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 MCCC1Q96RQ3 725 aaPredicted RBP19.78■□□□□ 0.76
COPS7A-218ENST00000543939 FAM96AQ9H5X1 160 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 ECT2Q9H8V3 914 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 POPDC3Q9HBV1 291 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 ZFP14Q9HCL3 533 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 HPS4Q9NQG7 708 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 VPS9D1Q9Y2B5 631 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 USH1CQ9Y6N9 552 aa19.78■□□□□ 0.76
COPS7A-218ENST00000543939 NPIPB15A6NHN6 443 aaPredicted RBP19.77■□□□□ 0.76
COPS7A-218ENST00000543939 LTA4HP09960 611 aaKnown RBP19.77■□□□□ 0.76
COPS7A-218ENST00000543939 MYL2P10916 166 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 SLC6A11P48066 632 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 CACNG1Q06432 222 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 ADAM15Q13444 863 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 ITGA9Q13797 1035 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 CSHL1Q14406 222 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 FAM83EQ2M2I3 478 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 AARS2Q5JTZ9 985 aaKnown RBP19.77■□□□□ 0.76
COPS7A-218ENST00000543939 CRTC1Q6UUV9 634 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 TMEM207Q6UWW9 146 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 VITQ6UXI7 678 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 GDPD4Q6W3E5 623 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 TPRG1Q6ZUI0 275 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 CCDC121Q6ZUS5 278 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 PIM3Q86V86 326 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 SPNS2Q8IVW8 549 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 MRPL57Q9BQC6 102 aaKnown RBP19.77■□□□□ 0.76
COPS7A-218ENST00000543939 HEPHQ9BQS7 1158 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 KDM4CQ9H3R0 1056 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 ABCF3Q9NUQ8 709 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 OXSMQ9NWU1 459 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 XPR1Q9UBH6 696 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 SLC8A2Q9UPR5 921 aa19.77■□□□□ 0.76
COPS7A-218ENST00000543939 FNDC3AQ9Y2H6 1198 aaKnown RBP19.77■□□□□ 0.76
COPS7A-218ENST00000543939 UBA6A0AVT1 1052 aaPredicted RBP19.76■□□□□ 0.75
COPS7A-218ENST00000543939 GAPDHSO14556 408 aaPredicted RBP19.76■□□□□ 0.75
COPS7A-218ENST00000543939 PFDN6O15212 129 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 ITM2AO43736 263 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 TRIM13O60858 407 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 CCDC166P0CW27 439 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 SLC1A6P48664 564 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 FCHO2Q0JRZ9 810 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 MESP2Q0VG99 397 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 AGAP9Q5VTM2 703 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 USP45Q70EL2 814 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 TSPAN33Q86UF1 283 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 CBARPQ8N350 705 aaPredicted RBP19.76■□□□□ 0.75
COPS7A-218ENST00000543939 ANKRD49Q8WVL7 239 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 MRPL46Q9H2W6 279 aaKnown RBP19.76■□□□□ 0.75
COPS7A-218ENST00000543939 ELOVL2Q9NXB9 296 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 SLC30A1Q9Y6M5 507 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 WASF2Q9Y6W5 498 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 FMO4P31512 558 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 ATAT1Q5SQI0 421 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 GRAMD4Q6IC98 578 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 CRLF3Q8IUI8 442 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 KLHL32Q96NJ5 620 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 BIRC8Q96P09 236 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 MYADMQ96S97 322 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 UNKQ9C0B0 810 aaKnown RBP19.76■□□□□ 0.75
COPS7A-218ENST00000543939 KCNK13Q9HB14 408 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 CLEC1BQ9P126 229 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 DEC1Q9P2X7 70 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 DCTN4Q9UJW0 460 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 MED16Q9Y2X0 877 aa19.76■□□□□ 0.75
COPS7A-218ENST00000543939 MTF2Q9Y483 593 aaPredicted RBP19.76■□□□□ 0.75
COPS7A-218ENST00000543939 MUC22E2RYF6 1773 aaPredicted RBP19.76■□□□□ 0.75
COPS7A-218ENST00000543939 LAMA3Q16787 3333 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 CDH23Q9H251 3354 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 PRRT4C9JH25 899 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 H2AFYO75367 372 aaKnown RBP19.75■□□□□ 0.75
COPS7A-218ENST00000543939 LYPLA1O75608 230 aaPredicted RBP19.75■□□□□ 0.75
COPS7A-218ENST00000543939 SRP72O76094 671 aaKnown RBP19.75■□□□□ 0.75
COPS7A-218ENST00000543939 BPIP17213 487 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 TECRLQ5HYJ1 363 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 ATG14Q6ZNE5 492 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 TAS2R42Q7RTR8 314 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 GRIN3AQ8TCU5 1115 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 SREK1Q8WXA9 508 aaKnown RBP19.75■□□□□ 0.75
COPS7A-218ENST00000543939 NXPE3Q969Y0 559 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 S1PR5Q9H228 398 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 BRD9Q9H8M2 597 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 IL26Q9NPH9 171 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 APPL1Q9UKG1 709 aa19.75■□□□□ 0.75
COPS7A-218ENST00000543939 DENND4AQ7Z401 1863 aa19.74■□□□□ 0.75
COPS7A-218ENST00000543939 TSPAN11A1L157 253 aa19.74■□□□□ 0.75
COPS7A-218ENST00000543939 A8MX80 341 aa19.74■□□□□ 0.75
COPS7A-218ENST00000543939 ARRB2P32121 409 aa19.74■□□□□ 0.75
COPS7A-218ENST00000543939 PTGER3P43115 390 aa19.74■□□□□ 0.75
COPS7A-218ENST00000543939 PRKAA2P54646 552 aa19.74■□□□□ 0.75
COPS7A-218ENST00000543939 ADARP55265 1226 aaKnown RBP19.74■□□□□ 0.75
COPS7A-218ENST00000543939 ABCE1P61221 599 aaKnown RBP19.74■□□□□ 0.75
COPS7A-218ENST00000543939 POLR2LP62875 67 aaKnown RBP19.74■□□□□ 0.75
COPS7A-218ENST00000543939 ACAP2Q15057 778 aa19.74■□□□□ 0.75
COPS7A-218ENST00000543939 SETMARQ53H47 684 aaPredicted RBP19.74■□□□□ 0.75
COPS7A-218ENST00000543939 LACTB2Q53H82 288 aaPredicted RBP19.74■□□□□ 0.75
COPS7A-218ENST00000543939 LIPMQ5VYY2 423 aa19.74■□□□□ 0.75
COPS7A-218ENST00000543939 KLC3Q6P597 504 aa19.74■□□□□ 0.75
COPS7A-218ENST00000543939 BRAT1Q6PJG6 821 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms