RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 TCEAL6Q6IPX3 200 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 PNCKQ6P2M8 343 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 Q6ZSR6 202 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 IQCHQ86VS3 1027 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 NLRP8Q86W28 1048 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 MMGT1Q8N4V1 131 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 DCLK2Q8N568 766 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 NOA1Q8NC60 698 aaKnown RBP13.58□□□□□ -0.24
SP140-213ENST00000543928 OR13H1Q8NG92 308 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 OR4K2Q8NGD2 314 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 TCEAL3Q969E4 200 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 SKA1Q96BD8 255 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 KLHDC7BQ96G42 594 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 AGAP2Q99490 1192 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 LRRC1Q9BTT6 524 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 DPH5Q9H2P9 285 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 CAPN10Q9HC96 672 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 XAB2Q9HCS7 855 aaKnown RBP13.58□□□□□ -0.24
SP140-213ENST00000543928 FSCN3Q9NQT6 498 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 SLC6A14Q9UN76 642 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 FNDC3AQ9Y2H6 1198 aaKnown RBP13.58□□□□□ -0.24
SP140-213ENST00000543928 SCN8AQ9UQD0 1980 aa13.58□□□□□ -0.24
SP140-213ENST00000543928 RIF1Q5UIP0 2472 aaKnown RBP13.57□□□□□ -0.24
SP140-213ENST00000543928 CCDC78A2IDD5 438 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 HEATR9A2RTY3 570 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 TLR4O00206 839 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 KHNYNO15037 678 aaKnown RBP13.57□□□□□ -0.24
SP140-213ENST00000543928 VILLO15195 856 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 MAGEC1O60732 1142 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 AVILO75366 819 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 SEC31AO94979 1220 aaKnown RBP13.57□□□□□ -0.24
SP140-213ENST00000543928 ZNF806P0C7X5 589 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 MLNP12872 115 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 TSHRP16473 764 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 ADRA1DP25100 572 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 MGAT1P26572 445 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 GPR1P46091 355 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 RABIFP47224 123 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 NPY2RP49146 381 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 ZNF140P52738 457 aaPredicted RBP13.57□□□□□ -0.24
SP140-213ENST00000543928 ITGA8P53708 1063 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 DCDC1P59894 354 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 PFN3P60673 137 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 IRX4P78413 519 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 TMPRSS15P98073 1019 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 PDE1BQ01064 536 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 OVGP1Q12889 678 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 MORF4L2Q15014 288 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 HENMT1Q5T8I9 393 aaKnown RBP13.57□□□□□ -0.24
SP140-213ENST00000543928 CAND1Q86VP6 1230 aaKnown RBP13.57□□□□□ -0.24
SP140-213ENST00000543928 HOOK3Q86VS8 718 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 OR13C4Q8NGS5 318 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 FAM174AQ8TBP5 190 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 SERPINB12Q96P63 405 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 PLEKHG4BQ96PX9 1271 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 RANBP9Q96S59 729 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 APOOQ9BUR5 198 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 NUSAP1Q9BXS6 441 aaKnown RBP13.57□□□□□ -0.24
SP140-213ENST00000543928 IL22Q9GZX6 179 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 RAB17Q9H0T7 212 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 CDH19Q9H159 772 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 L2HGDHQ9H9P8 463 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 PARD6AQ9NPB6 346 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 SEMA4GQ9NTN9 838 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 BFARQ9NZS9 450 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 NFKBIL1Q9UBC1 381 aaPredicted RBP13.57□□□□□ -0.24
SP140-213ENST00000543928 UTP11Q9Y3A2 253 aaKnown RBP13.57□□□□□ -0.24
SP140-213ENST00000543928 OR1A2Q9Y585 309 aa13.57□□□□□ -0.24
SP140-213ENST00000543928 MROH6A6NGR9 719 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 LRP3O75074 770 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 PPFIA2O75334 1257 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 SOD1P00441 154 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 PYGLP06737 847 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 TEAD1P28347 426 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 SPAM1P38567 509 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 THOP1P52888 689 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 NXPH1P58417 271 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 YPEL5P62699 121 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 CRADDP78560 199 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 SLC7A5Q01650 507 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 BNC1Q01954 994 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 GRIK2Q13002 908 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 PDE1CQ14123 709 aaPredicted RBP13.56□□□□□ -0.24
SP140-213ENST00000543928 SF3A2Q15428 464 aaKnown RBP13.56□□□□□ -0.24
SP140-213ENST00000543928 CSRP2Q16527 193 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 KIF19Q2TAC6 998 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 PCID2Q5JVF3 399 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 TPRG1LQ5T0D9 272 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 ZDHHC20Q5W0Z9 365 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 DUPD1Q68J44 220 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 HIBCHQ6NVY1 386 aaPredicted RBP13.56□□□□□ -0.24
SP140-213ENST00000543928 SLC22A18ASQ8N1D0 253 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 TRAM1L1Q8N609 369 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 BBOF1Q8ND07 529 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 PPHLN1Q8NEY8 458 aaKnown RBP13.56□□□□□ -0.24
SP140-213ENST00000543928 FUBP1Q96AE4 644 aaKnown RBP13.56□□□□□ -0.24
SP140-213ENST00000543928 DNAJC1Q96KC8 554 aaKnown RBP13.56□□□□□ -0.24
SP140-213ENST00000543928 SPATA16Q9BXB7 569 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 WDR26Q9H7D7 661 aa13.56□□□□□ -0.24
SP140-213ENST00000543928 IL26Q9NPH9 171 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms