RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CD40LGP29965 261 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 ARSFP54793 590 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 GP2P55259 537 aaKnown RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 PLIN5Q00G26 463 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 BNIP2Q12982 314 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 SURF1Q15526 300 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 AASDHQ4L235 1098 aaPredicted RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 CEP78Q5JTW2 689 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 COLEC12Q5KU26 742 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 C6orf141Q5SZD1 244 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 GADL1Q6ZQY3 521 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 TFAP2DQ7Z6R9 452 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 HS3ST5Q8IZT8 346 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 OR6Q1Q8NGQ2 317 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 ROPN1LQ96C74 230 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 LRRC58Q96CX6 371 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 NODALQ96S42 347 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 HOPXQ9BPY8 73 aaPredicted RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 BCO2Q9BYV7 579 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 RHOBTB2Q9BYZ6 727 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 B3GNT4Q9C0J1 378 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 EML4Q9HC35 981 aaKnown RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 MOV10Q9HCE1 1003 aaKnown RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 INTS10Q9NVR2 710 aaKnown RBP12.66□□□□□ -0.38
SMG8-202ENST00000543872 AASSQ9UDR5 926 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 UGT2A1Q9Y4X1 527 aa12.66□□□□□ -0.38
SMG8-202ENST00000543872 ZBTB24O43167 697 aaPredicted RBP12.65□□□□□ -0.38
SMG8-202ENST00000543872 PARNO95453 639 aaKnown RBP12.65□□□□□ -0.38
SMG8-202ENST00000543872 SUPT20HL2P0C7V6 817 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 PSMB9P28065 219 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 SNX17Q15036 470 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 SUPT20HL1Q3ZLR7 823 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 SYTL1Q8IYJ3 562 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 DNERQ8NFT8 737 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 ATL1Q8WXF7 558 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 TMBIM1Q969X1 311 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 BIRC7Q96CA5 298 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 DMRTB1Q96MA1 342 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 PPP1R16BQ96T49 567 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 AKTIPQ9H8T0 292 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 MEAF6Q9HAF1 191 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 TLR9Q9NR96 1032 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 GMIPQ9P107 970 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 HACD1B0YJ81 288 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 DYRK3O43781 588 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 TBC1D4O60343 1298 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 MSCO60682 206 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 RGS20O76081 388 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 LRIG2O94898 1065 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 KCNK2O95069 426 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 PFKMP08237 780 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 HOXD10P28358 340 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 MAP2K4P45985 399 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 ALDH7A1P49419 539 aaKnown RBP12.65□□□□□ -0.38
SMG8-202ENST00000543872 POU6F1Q14863 301 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 HABP4Q5JVS0 413 aaKnown RBP12.65□□□□□ -0.38
SMG8-202ENST00000543872 ZPBP2Q6X784 338 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 HPDLQ96IR7 371 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 ZFYVE19Q96K21 471 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 ALG2Q9H553 416 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 WDR6Q9NNW5 1121 aaKnown RBP12.65□□□□□ -0.38
SMG8-202ENST00000543872 PMF1-BGLAPU3KQ54 211 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 STRCQ7RTU9 1775 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 HOXC11O43248 304 aaPredicted RBP12.65□□□□□ -0.38
SMG8-202ENST00000543872 TOMM70O94826 608 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 GPX3P22352 226 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 GRB7Q14451 532 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 HIST2H2ACQ16777 129 aaPredicted RBP12.65□□□□□ -0.38
SMG8-202ENST00000543872 DACT2Q5SW24 774 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 DESI1Q6ICB0 168 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 SLC26A9Q7LBE3 791 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 PLD3Q8IV08 490 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 MFSD6LQ8IWD5 586 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMG8-202ENST00000543872 GPR78Q96P69 363 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 EMILIN2Q9BXX0 1053 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 CDHR5Q9HBB8 845 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 MAGEE1Q9HCI5 957 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 THG1LQ9NWX6 298 aaKnown RBP12.65□□□□□ -0.38
SMG8-202ENST00000543872 IL37Q9NZH6 218 aa12.65□□□□□ -0.38
SMG8-202ENST00000543872 CRNNQ9UBG3 495 aaPredicted RBP12.65□□□□□ -0.38
SMG8-202ENST00000543872 ZNF99A8MXY4 864 aaPredicted RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 AGRPO00253 132 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 ARHGAP33O14559 1287 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 C7P10643 843 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 PRKCAP17252 672 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 IL1RL1Q01638 556 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 DAG1Q14118 895 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 SOWAHAQ2M3V2 549 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 BTBD8Q5XKL5 378 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 C8orf82Q6P1X6 216 aaPredicted RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 PODNQ7Z5L7 613 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 ABI1Q8IZP0 508 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 RYBPQ8N488 228 aaPredicted RBP12.64□□□□□ -0.39
SMG8-202ENST00000543872 RORBQ92753 470 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 ITCHQ96J02 903 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 TXNDC15Q96J42 360 aa12.64□□□□□ -0.39
SMG8-202ENST00000543872 MRPL57Q9BQC6 102 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms