RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 MAP4K2Q12851 820 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CDC16Q13042 620 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 KRT81Q14533 505 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TIGD6Q17RP2 521 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 MPEG1Q2M385 716 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SMTNL2Q2TAL5 461 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PGS1Q32NB8 556 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 C5orf22Q49AR2 442 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 FBXO43Q4G163 708 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ODF2Q5BJF6 829 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PPP6R3Q5H9R7 873 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TMEM196Q5HYL7 178 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 KCNT1Q5JUK3 1230 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 NAIF1Q69YI7 327 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 GTF2IRD2BQ6EKJ0 949 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 LIN54Q6MZP7 749 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 FSTL4Q6MZW2 842 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CHST9Q7L1S5 443 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ANKS1BQ7Z6G8 1248 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 DAAM2Q86T65 1068 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 GTF2IRD2Q86UP8 949 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CIR1Q86X95 450 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PSTKQ8IV42 348 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ZC3H7AQ8IWR0 971 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CCAR2Q8N163 923 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PYROXD2Q8N2H3 581 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 TEX9Q8N6V9 391 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 RNF152Q8N8N0 203 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 KCTD6Q8NC69 237 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 OR10H5Q8NGA6 315 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 FIBINQ8TAL6 211 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CYB5D2Q8WUJ1 264 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 MYEOVQ96EZ4 313 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF830Q96NB3 372 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 PEBP4Q96S96 227 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SLX1AQ9BQ83 275 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 SNRNP25Q9BV90 132 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 DUSP23Q9BVJ7 150 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 OSBPL6Q9BZF3 934 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ZYG11BQ9C0D3 744 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 DHX35Q9H5Z1 703 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 LMAN1LQ9HAT1 526 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ABCF3Q9NUQ8 709 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 ABCB8Q9NUT2 735 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 GPATCH2LQ9NWQ4 482 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 DNAJC28Q9NX36 388 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 DCAF16Q9NXF7 216 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 EIF2B4Q9UI10 523 aaKnown RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 CLEC4EQ9ULY5 219 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 MTF2Q9Y483 593 aaPredicted RBP5.19□□□□□ -1.58
CLIP1-217ENST00000543205 DUSP10Q9Y6W6 482 aa5.19□□□□□ -1.58
CLIP1-217ENST00000543205 IGLV3-10A0A075B6K4 115 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SHISA7A6NL88 538 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 F8W8V4 182 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 FAM72CH0Y354 149 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 EEF2KO00418 725 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TRIM24O15164 1050 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 BUB1BO60566 1050 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 NDUFS2O75306 463 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 LEFTY1O75610 366 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CNTN5O94779 1100 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 MOCS3O95396 460 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TGDSO95455 350 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 EGFP01133 1207 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 GSNP06396 782 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TNNT1P13805 278 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TCF4P15884 667 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 NAT1P18440 290 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 AGXTP21549 392 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 COMTP21964 271 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 IL1R2P27930 398 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 EPHB2P29323 1055 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 OR1E1P30953 314 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 HTR7P34969 479 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 ATP6V1E1P36543 226 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 ARL4AP40617 200 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CLCN5P51795 746 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF135P52742 658 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SLC25A11Q02978 314 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 CA9Q16790 459 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 FAM72AQ5TYM5 149 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 FAM72DQ6L9T8 149 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 C11orf63Q6NUN7 778 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SLC30A6Q6NXT4 461 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 LETMD1Q6P1Q0 360 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 GALNTL5Q7Z4T8 443 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 BMP8AQ7Z5Y6 402 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 TFAP2DQ7Z6R9 452 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SETD3Q86TU7 594 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 FAM72BQ86X60 149 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 EGFL6Q8IUX8 553 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 MAP7D3Q8IWC1 876 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 RHOT1Q8IXI2 618 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF683Q8IZ20 524 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SAMD14Q8IZD0 417 aaPredicted RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SYCE1Q8N0S2 351 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 SHISA5Q8N114 240 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 PRR18Q8N4B5 295 aa5.18□□□□□ -1.58
CLIP1-217ENST00000543205 RNF10Q8N5U6 811 aaKnown RBP5.18□□□□□ -1.58
CLIP1-217ENST00000543205 PPM1NQ8N819 430 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms