RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 PAK5Q9P286 719 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 SHOC2Q9UQ13 582 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 SPO11Q9Y5K1 396 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 CACNA1AO00555 2505 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 TDRD6O60522 2096 aaKnown RBP18.32■□□□□ 0.52
COPS7A-216ENST00000543170 DCDC2BA2VCK2 349 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 TNFRSF10CO14798 259 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 SH3BP5O60239 455 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 AP2A1O95782 977 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 AGTP01019 485 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 GPR1P46091 355 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 PPARDQ03181 441 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 ZDHHC20Q5W0Z9 365 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 PDPK2PQ6A1A2 396 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 RFLNAQ6ZTI6 216 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 DGLUCYQ7Z3D6 616 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 GLT6D1Q7Z4J2 308 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 PHACTR4Q8IZ21 702 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 OR56A4Q8NGH8 313 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 SCAMP4Q969E2 229 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 MS4A14Q96JA4 679 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 NAPGQ99747 312 aaPredicted RBP18.32■□□□□ 0.52
COPS7A-216ENST00000543170 C19orf43Q9BQ61 176 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 FAM83DQ9H4H8 585 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 KLQ9UEF7 1012 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 CD84Q9UIB8 345 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 DGKBQ9Y6T7 804 aa18.32■□□□□ 0.52
COPS7A-216ENST00000543170 ARID1BQ8NFD5 2236 aaPredicted RBP18.31■□□□□ 0.52
COPS7A-216ENST00000543170 GOLGA8CPA6NN73 597 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 PPFIA2O75334 1257 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 RASGRP1O95267 797 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 KCNK5O95279 499 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 JUNDP17535 347 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 DGKAP23743 735 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 NOVA1P51513 510 aaKnown RBP18.31■□□□□ 0.52
COPS7A-216ENST00000543170 BNIP3Q12983 259 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 SEMA5AQ13591 1074 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 DENND5AQ6IQ26 1287 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 ENPP7Q6UWV6 458 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 GLRX5Q86SX6 157 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 GATAD2AQ86YP4 633 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 TTC30BQ8N4P2 665 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 ZNF548Q8NEK5 533 aaPredicted RBP18.31■□□□□ 0.52
COPS7A-216ENST00000543170 DEFB124Q8NES8 71 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 DTX3LQ8TDB6 740 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 BLOC1S5Q8TDH9 187 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 PLEKHG4BQ96PX9 1271 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 ZSCAN5AQ9BUG6 496 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 RIOK2Q9BVS4 552 aaKnown RBP18.31■□□□□ 0.52
COPS7A-216ENST00000543170 APOBEC3BQ9UH17 382 aaKnown RBP18.31■□□□□ 0.52
COPS7A-216ENST00000543170 KLF15Q9UIH9 416 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 PNMA8BQ9ULN7 279 aaPredicted RBP18.31■□□□□ 0.52
COPS7A-216ENST00000543170 BTBD3Q9Y2F9 522 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 CSNK1G3Q9Y6M4 447 aa18.31■□□□□ 0.52
COPS7A-216ENST00000543170 GOLGA6L10A0A0M3HER8 536 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 AURKAO14965 403 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 SUN1O94901 812 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 HK3P52790 923 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 SRP54P61011 504 aaKnown RBP18.3■□□□□ 0.52
COPS7A-216ENST00000543170 MSLNQ13421 630 aaPredicted RBP18.3■□□□□ 0.52
COPS7A-216ENST00000543170 ALG11Q2TAA5 492 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 FAXCQ5TGI0 409 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 PSAPL1Q6NUJ1 521 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 LINC00523Q86TU6 105 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 TRAM1L1Q8N609 369 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 SETD7Q8WTS6 366 aaKnown RBP18.3■□□□□ 0.52
COPS7A-216ENST00000543170 PDXPQ96GD0 296 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 COX14Q96I36 57 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 CDC6Q99741 560 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 LGR4Q9BXB1 951 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 FRMD8Q9BZ67 464 aaPredicted RBP18.3■□□□□ 0.52
COPS7A-216ENST00000543170 SLC13A1Q9BZW2 595 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 FGF22Q9HCT0 170 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.3■□□□□ 0.52
COPS7A-216ENST00000543170 IL17CQ9P0M4 197 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 SPASTQ9UBP0 616 aa18.3■□□□□ 0.52
COPS7A-216ENST00000543170 CTAGE9A4FU28 777 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 NEMP2A6NFY4 417 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 TMEM202A6NGA9 273 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 SDC3O75056 442 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 SLC4A1P02730 911 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 BPIP17213 487 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 FNTAP49354 379 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 PDE1BQ01064 536 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 OLIG2Q13516 323 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 TAF1AQ15573 450 aaPredicted RBP18.29■□□□□ 0.52
COPS7A-216ENST00000543170 ZNF542PQ5EBM4 170 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 PPM1JQ5JR12 505 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 GSTA5Q7RTV2 222 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 ERMP1Q7Z2K6 904 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 RBFAQ8N0V3 343 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 SDR16C5Q8N3Y7 309 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 SLC25A45Q8N413 288 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 FSTL5Q8N475 847 aaPredicted RBP18.29■□□□□ 0.52
COPS7A-216ENST00000543170 PDCD7Q8N8D1 485 aaKnown RBP18.29■□□□□ 0.52
COPS7A-216ENST00000543170 GLIS1Q8NBF1 620 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 GPR26Q8NDV2 337 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 BRSK1Q8TDC3 778 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 RHBDD1Q8TEB9 315 aa18.29■□□□□ 0.52
COPS7A-216ENST00000543170 HIC2Q96JB3 615 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms