RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 MKLN1Q9UL63 735 aa2.35□□□□□ -2.03
KNTC1-213ENST00000542727 CDC14AQ9UNH5 594 aa2.35□□□□□ -2.03
KNTC1-213ENST00000542727 NFE2L3Q9Y4A8 694 aa2.35□□□□□ -2.03
KNTC1-213ENST00000542727 CGNL1Q0VF96 1302 aa2.35□□□□□ -2.03
KNTC1-213ENST00000542727 ATXN2Q99700 1313 aaKnown RBP2.35□□□□□ -2.03
KNTC1-213ENST00000542727 IGKV3D-15A0A087WSY6 115 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 IGKV3D-20A0A0C4DH25 116 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 A0A0U1RQF3 1178 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 A0A1B0GU03 582 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 LILRA5A6NI73 299 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 USP17L23D6RBM5 183 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 RFPL2O75678 378 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 NDUFB4O95168 129 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 RTN3O95197 1032 aaPredicted RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 CLDN14O95500 239 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 MMP2P08253 660 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 CYC1P08574 325 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SRCP12931 536 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 CD58P19256 250 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 EPHA8P29322 1005 aaPredicted RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 ELF1P32519 619 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 TIMP3P35625 211 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 DDIT3P35638 169 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 CPOXP36551 454 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 RARSP54136 660 aaKnown RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 PITX1P78337 314 aaPredicted RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SLC20A2Q08357 652 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 ZNF155Q12901 538 aaPredicted RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 FOXD4Q12950 439 aaPredicted RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 NAE1Q13564 534 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 FRG1Q14331 258 aaKnown RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 TSTQ16762 297 aaKnown RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 TMEM30BQ3MIR4 351 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 AMZ1Q400G9 498 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 PAPPA-AS1Q5QFB9 102 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 INTS11Q5TA45 600 aaKnown RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 TXNDC8Q6A555 127 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 WDR73Q6P4I2 378 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SLC36A4Q6YBV0 504 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 CCNI2Q6ZMN8 369 aaPredicted RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SLC26A9Q7LBE3 791 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 CPLX4Q7Z7G2 160 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 NFE4Q86UQ8 179 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SLC35F3Q8IY50 421 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 DSELQ8IZU8 1212 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SCCPDHQ8NBX0 429 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 NAXEQ8NCW5 288 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 IL17REQ8NFR9 667 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 HUS1BQ8NHY5 278 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 FAM76AQ8TAV0 307 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 METTL6Q8TCB7 284 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 MAGEC3Q8TD91 643 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 UCMAQ8WVF2 138 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SNAPC3Q92966 411 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 GTF3C6Q969F1 213 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SMARCE1Q969G3 411 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 C3orf30Q96M34 536 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 CHMP4AQ9BY43 222 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 ZNF696Q9H7X3 374 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 FBRSL1Q9HCM7 1045 aaKnown RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SCRT2Q9NQ03 307 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SLC6A13Q9NSD5 602 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 ABCF3Q9NUQ8 709 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 TAS2R10Q9NYW0 307 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 FBXO9Q9UK97 447 aaPredicted RBP2.34□□□□□ -2.03
KNTC1-213ENST00000542727 KCNS2Q9ULS6 477 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 SCINQ9Y6U3 715 aa2.34□□□□□ -2.03
KNTC1-213ENST00000542727 A0A0G2JPF8 293 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 TMEM202A6NGA9 273 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 TTC36A6NLP5 189 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 HNRNPCL3B7ZW38 293 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 AKR1B15C9JRZ8 316 aaPredicted RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 J3KRW8 73 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 SOCS6O14544 535 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 EPB41L2O43491 1005 aaKnown RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 HNRNPCL1O60812 293 aaKnown RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 TBX6O95947 436 aaPredicted RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 ZNF883P0CG24 379 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 HNRNPCL4P0DMR1 293 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 CD53P19397 219 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 AGAP20933 346 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 TNFAIP3P21580 790 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 MARK3P27448 753 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 CHATP28329 748 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 HNRNPH1P31943 449 aaKnown RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 RGS2P41220 211 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 CCR9P51686 369 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 NR0B1P51843 470 aaKnown RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 EIF3BP55884 814 aaKnown RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 KRTAP10-3P60369 221 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 TMEM115Q12893 351 aaPredicted RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 TBX2Q13207 712 aaPredicted RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 FGFBP1Q14512 234 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 DRAP1Q14919 205 aaPredicted RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 TBCEQ15813 527 aaPredicted RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 PRICKLE4Q2TBC4 344 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 HAUS3Q68CZ6 603 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 ZNF772Q68DY9 489 aaPredicted RBP2.33□□□□□ -2.04
KNTC1-213ENST00000542727 ANKRD54Q6NXT1 300 aa2.33□□□□□ -2.04
KNTC1-213ENST00000542727 CDC73Q6P1J9 531 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms