RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 CSRP3P50461 194 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 BFSP2Q13515 415 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 SLC36A3Q495N2 470 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 PERM1Q5SV97 790 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 RWDD4Q6NW29 188 aaKnown RBP9.14□□□□□ -0.95
THBS3-211ENST00000541990 PIWIL3Q7Z3Z3 882 aaKnown RBP9.14□□□□□ -0.95
THBS3-211ENST00000541990 TMEM135Q86UB9 458 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 DHFR2Q86XF0 187 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 ARL10Q8N8L6 244 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 C11orf84Q9BUA3 381 aaPredicted RBP9.14□□□□□ -0.95
THBS3-211ENST00000541990 MLPHQ9BV36 600 aaPredicted RBP9.14□□□□□ -0.95
THBS3-211ENST00000541990 LRRC40Q9H9A6 602 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 LTB4R2Q9NPC1 389 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 PCDH12Q9NPG4 1184 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 CXXC1Q9P0U4 656 aaPredicted RBP9.14□□□□□ -0.95
THBS3-211ENST00000541990 TMEM181Q9P2C4 612 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 KLHL8Q9P2G9 620 aaPredicted RBP9.14□□□□□ -0.95
THBS3-211ENST00000541990 FAM32AQ9Y421 112 aaKnown RBP9.14□□□□□ -0.95
THBS3-211ENST00000541990 ST14Q9Y5Y6 855 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 DGKBQ9Y6T7 804 aa9.14□□□□□ -0.95
THBS3-211ENST00000541990 RNF103-CHMP3A0A140T963 221 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 I6L893 689 aaPredicted RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 NME4O00746 187 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 SLC22A2O15244 555 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 MSI1O43347 362 aaKnown RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 TBX18O95935 607 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 BMP2P12643 396 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 ZNF12P17014 697 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 PSMD8P48556 350 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 NR2C2P49116 596 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 YWHAHQ04917 246 aaPredicted RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 CTBP1Q13363 440 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 PCBP1Q15365 356 aaKnown RBP eCLIP9.13□□□□□ -0.95
THBS3-211ENST00000541990 CLEC6AQ6EIG7 209 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 SLC2A7Q6PXP3 512 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 C4orf22Q6V702 233 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 ZC3HC1Q86WB0 502 aaKnown RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 RAVER1Q8IY67 606 aaKnown RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 CRYBG2Q8N1P7 616 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 BPIFB6Q8NFQ5 453 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 ADAMTS16Q8TE57 1224 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 TRPC4APQ8TEL6 797 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 GPR78Q96P69 363 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 LRRC4Q9HBW1 653 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 EIF2B3Q9NR50 452 aaKnown RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 TRIM64A6NGJ6 449 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 FAM72CH0Y354 149 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 AURKAO14965 403 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 ACOX3O15254 700 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 SNAP29O95721 258 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 MTHFD1P11586 935 aaKnown RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 NPR3P17342 541 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 CD68P34810 354 aaPredicted RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 GRIK1P39086 918 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 TMED10P49755 219 aaKnown RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 BST2Q10589 180 aaKnown RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 PYCR3Q53H96 274 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 FAM72AQ5TYM5 149 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 FAM72DQ6L9T8 149 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 CYHR1Q6ZMK1 362 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 FAM72BQ86X60 149 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 FUNDC1Q8IVP5 155 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 OR2T34Q8NGX1 318 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 OR2T3Q8NH03 318 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 GIPC2Q8TF65 315 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 SREK1Q8WXA9 508 aaKnown RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 SEPT8Q92599 483 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 PBXIP1Q96AQ6 731 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 POMKQ9H5K3 350 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 NANOGQ9H9S0 305 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 UTP6Q9NYH9 597 aaKnown RBP9.13□□□□□ -0.95
THBS3-211ENST00000541990 TLK1Q9UKI8 766 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 ERGIC3Q9Y282 383 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 TCAF1Q9Y4C2 921 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 FADS3Q9Y5Q0 445 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 USP34Q70CQ2 3546 aa9.13□□□□□ -0.95
THBS3-211ENST00000541990 CFAP99D6REC4 459 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 ZNF701M0R085 212 aaPredicted RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 CLOCKO15516 846 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 ZBTB24O43167 697 aaPredicted RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 H2AFYO75367 372 aaKnown RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 SRP72O76094 671 aaKnown RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 AHSGP02765 367 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 WARSP23381 471 aaKnown RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 NFKBIAP25963 317 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 PTPN3P26045 913 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 OPRL1P41146 370 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 PNPLA4P41247 253 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 GJA8P48165 433 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 PIGFQ07326 219 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 ZBTB17Q13105 803 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 PRPSAP1Q14558 356 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 ANO4Q32M45 955 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 C6orf183Q5T699 404 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 OTUD1Q5VV17 481 aaPredicted RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 TMEM214Q6NUQ4 689 aaKnown RBP9.12□□□□□ -0.95
THBS3-211ENST00000541990 NIPAL1Q6NVV3 410 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 TBPL2Q6SJ96 375 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 RNF135Q8IUD6 432 aa9.12□□□□□ -0.95
THBS3-211ENST00000541990 TOP6BLQ8N6T0 577 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms