RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 HGSO14964 777 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 DUX1O43812 170 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 IVLP07476 585 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 CD82P27701 267 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 HCAR3P49019 387 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 TLE1Q04724 770 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 SRSF1Q07955 248 aaKnown RBP eCLIP15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 DPYSL2Q16555 572 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 LRRC66Q68CR7 880 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 CPNE8Q86YQ8 564 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 AOPEPQ8N6M6 819 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 SLC37A2Q8TED4 501 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 LRRN4Q8WUT4 740 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 HSPH1Q92598 858 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 ZNF653Q96CK0 615 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 SCARF2Q96GP6 870 aaPredicted RBP15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 BTBD6Q96KE9 485 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 TAAR9Q96RI9 348 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 EIF3CQ99613 913 aaKnown RBP15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 GEMIN8Q9NWZ8 242 aaKnown RBP15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 DONSONQ9NYP3 566 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 MYO1AQ9UBC5 1043 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 PRKAB1Q9Y478 270 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 PCDHGA3Q9Y5H0 932 aa15.4■□□□□ 0.06
CLSTN3-213ENST00000541953 PDE2AO00408 941 aaPredicted RBP15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 FTLP02792 175 aaPredicted RBP15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 RENBPP51606 427 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 SKIDA1Q1XH10 827 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 COLEC12Q5KU26 742 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 ANKS6Q68DC2 871 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 OR4D9Q8NGE8 314 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 SCRN2Q96FV2 425 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 OR2M4Q96R27 311 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 CTRCQ99895 268 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 SLC25A18Q9H1K4 315 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 EPN3Q9H201 632 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 ZWILCHQ9H900 591 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 NT5MQ9NPB1 228 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 PHTF1Q9UMS5 762 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 OAS3Q9Y6K5 1087 aaKnown RBP15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 NBASA2RRP1 2371 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 LRRK2Q5S007 2527 aa15.39■□□□□ 0.05
CLSTN3-213ENST00000541953 EFCAB7A8K855 629 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 H3BRJ5 948 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 INPP4BO15327 924 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 FZD6O60353 706 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 PPFIA2O75334 1257 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 RNF8O76064 485 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 MAP3K6O95382 1288 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 CD48P09326 243 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 RARAP10276 462 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 CYP2A6P11509 494 aaPredicted RBP15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 SKILP12757 684 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 CDK11BP21127 795 aaKnown RBP15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 TEAD1P28347 426 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 MMP13P45452 471 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 GPR3P46089 330 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 GPR1P46091 355 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 POLE2P56282 527 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 PTSQ03393 145 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 DPTQ07507 201 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 MMRN1Q13201 1228 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 PYCR3Q53H96 274 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 TMEM164Q5U3C3 297 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 TMCO3Q6UWJ1 677 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 TIPARPQ7Z3E1 657 aaKnown RBP15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 FAM129CQ86XR2 697 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 PSTKQ8IV42 348 aaKnown RBP15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 UNC5BQ8IZJ1 945 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 ATPAF2Q8N5M1 289 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 IL22RA1Q8N6P7 574 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 ZSCAN1Q8NBB4 408 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 COX14Q96I36 57 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 WDR24Q96S15 920 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 SPRY4Q9C004 299 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 B3GNT4Q9C0J1 378 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 PCDH18Q9HCL0 1135 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 APMAPQ9HDC9 416 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 SLC39A1Q9NY26 324 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 KCNK4Q9NYG8 393 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 PPIL1Q9Y3C6 166 aa15.38■□□□□ 0.05
CLSTN3-213ENST00000541953 PSMD11O00231 422 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 NKX2-8O15522 239 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 MFSD11O43934 449 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 RAD1O60671 282 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 IL4RP24394 825 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 HSPA9P38646 679 aaKnown RBP15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 SLC25A11Q02978 314 aaKnown RBP15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 SQSTM1Q13501 440 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 ASIC2Q16515 512 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 STX1AQ16623 288 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 SNAP47Q5SQN1 464 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 ARMC12Q5T9G4 340 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 ATP1A1-AS1Q5TC04 95 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 XKR5Q6UX68 686 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 ADAMTSL4Q6UY14 1074 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 CLEC17AQ6ZS10 378 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 CACNA2D3Q8IZS8 1091 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms