RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 RAB10P61026 200 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 HERVK_113P62684 666 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 DPYSL3Q14195 570 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 C9orf64Q5T6V5 341 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 SCUBE3Q8IX30 993 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 CEP76Q8TAP6 659 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 KCNE2Q9Y6J6 123 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 ZNF823P16415 610 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 AFF1P51825 1210 aaKnown RBP15.33■□□□□ 0.05
HMGA2-210ENST00000541363 SLC9B1Q4ZJI4 515 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 HSDL2Q6YN16 418 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 ADAM32Q8TC27 787 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 ADAMTS15Q8TE58 950 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 COQ8BQ96D53 544 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 ARCQ7LC44 396 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 TAPBPLQ9BX59 468 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 RNF121Q9H920 327 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 POPDC2Q9HBU9 364 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 TCF7L1Q9HCS4 588 aa15.33■□□□□ 0.05
HMGA2-210ENST00000541363 FBXO6Q9NRD1 293 aaPredicted RBP15.33■□□□□ 0.05
HMGA2-210ENST00000541363 RGS17Q9UGC6 210 aaPredicted RBP15.33■□□□□ 0.05
HMGA2-210ENST00000541363 BBIP1A8MTZ0 92 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 SLC22A3O75751 556 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 IFNA21P01568 189 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 SSTP61278 116 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 BTG3Q14201 252 aaPredicted RBP15.33■□□□□ 0.04
HMGA2-210ENST00000541363 VMACQ2NL98 169 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 EGFLAMQ63HQ2 1017 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 SLC39A3Q9BRY0 314 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 AP4B1Q9Y6B7 739 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 ADGRL2O95490 1459 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 GLI1P08151 1106 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 CREMQ03060 361 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 NDUFA9Q16795 377 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 NYAP1Q6ZVC0 841 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 SPATA19Q7Z5L4 167 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 OR4C6Q8NH72 309 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 MROH8Q9H579 483 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 MYH6P13533 1939 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 ZMPSTE24O75844 475 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 MSL3P1P0C860 447 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 CXCL8P10145 99 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 LHCGRP22888 699 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 DRG2P55039 364 aaKnown RBP15.33■□□□□ 0.04
HMGA2-210ENST00000541363 ZNF844Q08AG5 666 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 SNAP47Q5SQN1 464 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 CDC42EP5Q6NZY7 148 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 FAM83AQ86UY5 434 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 SIRT2Q8IXJ6 389 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 PNLDC1Q8NA58 520 aaKnown RBP15.33■□□□□ 0.04
HMGA2-210ENST00000541363 JSRP1Q96MG2 331 aaPredicted RBP15.33■□□□□ 0.04
HMGA2-210ENST00000541363 MCMBPQ9BTE3 642 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 MYOZ2Q9NPC6 264 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 RPH3AQ9Y2J0 694 aaPredicted RBP15.33■□□□□ 0.04
HMGA2-210ENST00000541363 ZNF286BP0CG31 522 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 ZNF155Q12901 538 aaPredicted RBP15.33■□□□□ 0.04
HMGA2-210ENST00000541363 PTPRKQ15262 1439 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 C1orf186Q6ZWK4 172 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 SLC5A5Q92911 643 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 TSPAN18Q96SJ8 248 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 ADGRL3Q9HAR2 1447 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 MRPL17Q9NRX2 175 aaKnown RBP15.33■□□□□ 0.04
HMGA2-210ENST00000541363 PDP1Q9P0J1 537 aaPredicted RBP15.33■□□□□ 0.04
HMGA2-210ENST00000541363 CNTNAP5Q8WYK1 1306 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 E7ENX8 843 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 SLC6A3Q01959 620 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 SLC39A12Q504Y0 691 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 FAM46CQ5VWP2 391 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 GPR135Q8IZ08 494 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 ATG10Q9H0Y0 220 aa15.33■□□□□ 0.04
HMGA2-210ENST00000541363 KCNK1O00180 336 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 PITPNM1O00562 1244 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 GRIN3BO60391 1043 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 ATP5C1P36542 298 aaKnown RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 PRKCDQ05655 676 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 SHQ1Q6PI26 577 aaKnown RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 FIP1L1Q6UN15 594 aaKnown RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 SSX6Q7RTT6 188 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 FAM13CQ8NE31 585 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 HOPXQ9BPY8 73 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 SGK2Q9HBY8 427 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 POLR3HQ9Y535 204 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 CACNB4O00305 520 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 CLPXO76031 633 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 GNAO1P09471 354 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 LINGO3P0C6S8 592 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 PSMB4P28070 264 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 IL12BP29460 328 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 METTL21CQ5VZV1 264 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 MKL1Q969V6 931 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 KXD1Q9BQD3 176 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 RTKNQ9BST9 563 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 AARSD1Q9BTE6 412 aaKnown RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 IFT52Q9Y366 437 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 TMEM2Q9UHN6 1383 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 PSKH1P11801 424 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 CIR1Q86X95 450 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 GPR65Q8IYL9 337 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 S100PBPQ96BU1 408 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms