RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 A0A0J9YYE9 177 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 H0Y858 1186 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 ZNF623O75123 536 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 BMP10O95393 424 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 MATN4O95460 622 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 ZNF37AP17032 561 aaPredicted RBP9.53□□□□□ -0.88
CNOT4-212ENST00000541284 GPR15P49685 360 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 ATP6V0D1P61421 351 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 FSCN1Q16658 493 aaKnown RBP9.53□□□□□ -0.88
CNOT4-212ENST00000541284 SPRED1Q7Z699 444 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 OR52K2Q8NGK3 314 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 FAM81AQ8TBF8 368 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 CALML6Q8TD86 181 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 RRAGCQ9HB90 399 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 MRPL40Q9NQ50 206 aaKnown RBP9.53□□□□□ -0.88
CNOT4-212ENST00000541284 TLR9Q9NR96 1032 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 PNPLA3Q9NST1 481 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 MRGBPQ9NV56 204 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 POLG2Q9UHN1 485 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 GPR45Q9Y5Y3 372 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 ST14Q9Y5Y6 855 aa9.53□□□□□ -0.88
CNOT4-212ENST00000541284 UBXN8O00124 270 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TRMUO75648 421 aaKnown RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 B3GAT3O94766 335 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 MOCS2O96007 188 aaPredicted RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 GRIA3P42263 894 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 CCT8P50990 548 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 SLC12A2P55011 1212 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 GPNMBQ14956 572 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 ATP6AP1Q15904 470 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 FXNQ16595 210 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TFAP2DQ7Z6R9 452 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 DHFR2Q86XF0 187 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 EGFL6Q8IUX8 553 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 CMTR2Q8IYT2 770 aaKnown RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TSPAN17Q96FV3 270 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 SUSD3Q96L08 255 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TBATAQ96M53 351 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TMEM79Q9BSE2 394 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 CPA4Q9UI42 421 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TLR6Q9Y2C9 796 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TRIM64BA6NI03 449 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 BBIP1A8MTZ0 92 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 HNRNPRO43390 633 aaKnown RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TRPA1O75762 1119 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 SUPT7LO94864 414 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 CTSHP09668 335 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 RHOQP17081 205 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 MYF6P23409 242 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TUBA4AP68366 448 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 CYTH1Q15438 398 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 ADRM1Q16186 407 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 VPS26BQ4G0F5 336 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 PYCR3Q53H96 274 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 CLYBLQ8N0X4 340 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 PTGR2Q8N8N7 351 aaPredicted RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 HM13Q8TCT9 377 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TWIST2Q8WVJ9 160 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TMEM125Q96AQ2 219 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 MYRFLQ96LU7 910 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 PHF12Q96QT6 1004 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TRIB3Q96RU7 358 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 ZIC5Q96T25 663 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 PDFQ9HBH1 243 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 DSEQ9UL01 958 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 CRYL1Q9Y2S2 319 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 ARL5AQ9Y689 179 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 OAS3Q9Y6K5 1087 aaKnown RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 REV3LO60673 3130 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 A0A0J9YVX5 310 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 GOT2P00505 430 aaKnown RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 PYGLP06737 847 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 SH3BGRP55822 239 aaPredicted RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 NME5P56597 212 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 CRHR2Q13324 411 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 MAP7Q14244 749 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 CAPRIN1Q14444 709 aaKnown RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TYSND1Q2T9J0 566 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 SLC36A3Q495N2 470 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 SDHAF4Q5VUM1 108 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 OVOS1Q6IE37 1185 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 BLOC1S3Q6QNY0 202 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 RPL10LQ96L21 214 aaKnown RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TCF12Q99081 682 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 TRIM62Q9BVG3 475 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 KATNAL1Q9BW62 490 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 RGS18Q9NS28 235 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 IL37Q9NZH6 218 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 HACD3Q9P035 362 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 UXTQ9UBK9 157 aaPredicted RBP9.52□□□□□ -0.89
CNOT4-212ENST00000541284 SQORQ9Y6N5 450 aa9.52□□□□□ -0.89
CNOT4-212ENST00000541284 CCDC162PA2VCL2 907 aa9.51□□□□□ -0.89
CNOT4-212ENST00000541284 AQP12BA6NM10 295 aa9.51□□□□□ -0.89
CNOT4-212ENST00000541284 TMX2-CTNND1H3BSU7 103 aa9.51□□□□□ -0.89
CNOT4-212ENST00000541284 PSMA3P25788 255 aa9.51□□□□□ -0.89
CNOT4-212ENST00000541284 KCTD21Q4G0X4 260 aa9.51□□□□□ -0.89
CNOT4-212ENST00000541284 XKR7Q5GH72 579 aa9.51□□□□□ -0.89
CNOT4-212ENST00000541284 KLC3Q6P597 504 aa9.51□□□□□ -0.89
CNOT4-212ENST00000541284 SPPL2CQ8IUH8 684 aa9.51□□□□□ -0.89
CNOT4-212ENST00000541284 AQP12AQ8IXF9 295 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms