RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 MYCLP1P12525 358 aaPredicted RBP18.71■□□□□ 0.59
VPS33A-205ENST00000541169 HOXD11P31277 338 aaPredicted RBP18.71■□□□□ 0.59
VPS33A-205ENST00000541169 GPR1P46091 355 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 CCT8P50990 548 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 PDE1CQ14123 709 aaPredicted RBP18.71■□□□□ 0.59
VPS33A-205ENST00000541169 NFATC4Q14934 902 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 INAVAQ3KP66 663 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 HENMT1Q5T8I9 393 aaKnown RBP18.71■□□□□ 0.59
VPS33A-205ENST00000541169 FAXCQ5TGI0 409 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 RAET1GQ6H3X3 334 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 TCEAL6Q6IPX3 200 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 KIAA2013Q8IYS2 634 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 PEX13Q92968 403 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 TCEAL3Q969E4 200 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 DDX47Q9H0S4 455 aaKnown RBP18.71■□□□□ 0.59
VPS33A-205ENST00000541169 ABCG8Q9H221 673 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 SMOC1Q9H4F8 434 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 IL17CQ9P0M4 197 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 APPL1Q9UKG1 709 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 SPO11Q9Y5K1 396 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.71■□□□□ 0.59
VPS33A-205ENST00000541169 PIEZO1Q92508 2521 aa18.71■□□□□ 0.59
VPS33A-205ENST00000541169 EP300Q09472 2414 aaPredicted RBP18.71■□□□□ 0.59
VPS33A-205ENST00000541169 HEATR9A2RTY3 570 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 URI1O94763 535 aaPredicted RBP18.7■□□□□ 0.58
VPS33A-205ENST00000541169 PIRTP0C851 137 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 MLNP12872 115 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 NPY2RP49146 381 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 BNC1Q01954 994 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 MSLNQ13421 630 aaPredicted RBP18.7■□□□□ 0.58
VPS33A-205ENST00000541169 ITGA9Q13797 1035 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 PTK6Q13882 451 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 FAM182AQ5T1J6 154 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 SDR16C5Q8N3Y7 309 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 TTC30BQ8N4P2 665 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 TRAM1L1Q8N609 369 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 MNS1Q8NEH6 495 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 SPATA4Q8NEY3 305 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 EID2BQ96D98 161 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 HIC2Q96JB3 615 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 RANBP9Q96S59 729 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 APOL2Q9BQE5 337 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 FRMD8Q9BZ67 464 aaPredicted RBP18.7■□□□□ 0.58
VPS33A-205ENST00000541169 CASS4Q9NQ75 786 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 BFARQ9NZS9 450 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 MYO15AQ9UKN7 3530 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 RIMKLBQ9ULI2 386 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 CA5BQ9Y2D0 317 aa18.7■□□□□ 0.58
VPS33A-205ENST00000541169 A0A1B0GTQ1 180 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 GPR89AB7ZAQ6 455 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 CDX4O14627 284 aaPredicted RBP18.69■□□□□ 0.58
VPS33A-205ENST00000541169 USP12O75317 370 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 GPR89BP0CG08 455 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 ADCY8P40145 1251 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 HNRNPKP61978 463 aaKnown RBP eCLIP18.69■□□□□ 0.58
VPS33A-205ENST00000541169 SPARCL1Q14515 664 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 PTPRRQ15256 657 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 SKIDA1Q1XH10 827 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 STPG1Q5TH74 334 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 SPATS2Q86XZ4 545 aaKnown RBP18.69■□□□□ 0.58
VPS33A-205ENST00000541169 SLC22A18ASQ8N1D0 253 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 MCUQ8NE86 351 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 PTCD2Q8WV60 388 aaKnown RBP18.69■□□□□ 0.58
VPS33A-205ENST00000541169 ZNF592Q92610 1267 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 WDR92Q96MX6 357 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 RIOK2Q9BVS4 552 aaKnown RBP18.69■□□□□ 0.58
VPS33A-205ENST00000541169 IL22Q9GZX6 179 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 XAB2Q9HCS7 855 aaKnown RBP18.69■□□□□ 0.58
VPS33A-205ENST00000541169 ASIC3Q9UHC3 531 aa18.69■□□□□ 0.58
VPS33A-205ENST00000541169 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.68■□□□□ 0.58
VPS33A-205ENST00000541169 FAM187AA6NFU0 413 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 NEMP2A6NFY4 417 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 CSF2P04141 144 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 NME1P15531 152 aaKnown RBP18.68■□□□□ 0.58
VPS33A-205ENST00000541169 ADRA1DP25100 572 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 SPAM1P38567 509 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 CDK3Q00526 305 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 PPARDQ03181 441 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 FZD2Q14332 565 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 TRIP13Q15645 432 aaPredicted RBP18.68■□□□□ 0.58
VPS33A-205ENST00000541169 LRRC8BQ6P9F7 803 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 HOOK3Q86VS8 718 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 HEATR4Q86WZ0 1026 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 KLHL7Q8IXQ5 586 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 PPIL6Q8IXY8 311 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 TAB3Q8N5C8 712 aaPredicted RBP18.68■□□□□ 0.58
VPS33A-205ENST00000541169 PLA2G15Q8NCC3 412 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 BBOF1Q8ND07 529 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 GPR26Q8NDV2 337 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 OR56A4Q8NGH8 313 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 STYXQ8WUJ0 223 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 SCAMP4Q969E2 229 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 FUBP1Q96AE4 644 aaKnown RBP18.68■□□□□ 0.58
VPS33A-205ENST00000541169 VPS35Q96QK1 796 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 SMIM14Q96QK8 99 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 SPATA16Q9BXB7 569 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 TM7SF3Q9NS93 570 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 VPS18Q9P253 973 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 CD84Q9UIB8 345 aa18.68■□□□□ 0.58
VPS33A-205ENST00000541169 CDV3Q9UKY7 258 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms