RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 SP110Q9HB58 689 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 KCNK9Q9NPC2 374 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 SFMBT1Q9UHJ3 866 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 IPO11Q9UI26 975 aaKnown RBP8.42□□□□□ -1.06
CHD4-208ENST00000540960 RABGEF1Q9UJ41 708 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 ANAPC1Q9H1A4 1944 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 FAM237BA0A1B0GVD1 139 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 TCRBV9S1A1TA0A576 114 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 E2F8A0AVK6 867 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 ILVBLA1L0T0 632 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 FAM72CH0Y354 149 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 DIAPH2O60879 1101 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 METTL18O95568 372 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 FAM107AO95990 144 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 MOCS2O96007 188 aaPredicted RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 EPOP01588 193 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 JCHAINP01591 159 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 CCT8P50990 548 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 ATP1A2P50993 1020 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 DMTNQ08495 405 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 MGAT5Q09328 741 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 SRSF6Q13247 344 aaKnown RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 ZNF177Q13360 481 aaPredicted RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 SPARCL1Q14515 664 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 POLD3Q15054 466 aaPredicted RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 DBN1Q16643 649 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 HSF5Q4G112 596 aaPredicted RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 RALGPS1Q5JS13 557 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 ADGRF1Q5T601 910 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 FAM72AQ5TYM5 149 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 GKAP1Q5VSY0 366 aaPredicted RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 STEAP4Q687X5 459 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 FAM72DQ6L9T8 149 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 CCDC91Q7Z6B0 441 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 CPLX4Q7Z7G2 160 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 TRABD2AQ86V40 505 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 EXOC3L1Q86VI1 746 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 CAND1Q86VP6 1230 aaKnown RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 FAM72BQ86X60 149 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 ANKMY2Q8IV38 441 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 LMNTD2Q8IXW0 634 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 SH2D3CQ8N5H7 860 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 BCAS4Q8TDM0 211 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 SLC44A1Q8WWI5 657 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 SREK1Q8WXA9 508 aaKnown RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 SCG3Q8WXD2 468 aaKnown RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 PEX13Q92968 403 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 CHMP6Q96FZ7 201 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 TOE1Q96GM8 510 aaKnown RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 CABS1Q96KC9 395 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 XPO6Q96QU8 1125 aaKnown RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 SRPK1Q96SB4 655 aaKnown RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 ACOX2Q99424 681 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 PAFAH2Q99487 392 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 DHRS4Q9BTZ2 278 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 FSD1LQ9BXM9 530 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 SLC25A51Q9H1U9 297 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 TRABDQ9H4I3 376 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 MRM3Q9HC36 420 aaKnown RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 GLOD4Q9HC38 313 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 CASS4Q9NQ75 786 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 DNAJC17Q9NVM6 304 aaKnown RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 WSB2Q9NYS7 404 aaPredicted RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 VANGL2Q9ULK5 521 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 MAGED2Q9UNF1 606 aaPredicted RBP8.41□□□□□ -1.06
CHD4-208ENST00000540960 CHMP2BQ9UQN3 213 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 ANKRD6Q9Y2G4 727 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 KIF26BQ2KJY2 2108 aa8.41□□□□□ -1.06
CHD4-208ENST00000540960 ABCA2Q9BZC7 2435 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 GOLGA6L7A0A1B0GV03 622 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 A0A1B0GVM2 712 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 TMEM120BA0PK00 339 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 TCAF2A6NFQ2 919 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 METTL12A8MUP2 240 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 KCNK1O00180 336 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 SCAMP3O14828 347 aaKnown RBP8.4□□□□□ -1.06
CHD4-208ENST00000540960 ZBTB24O43167 697 aaPredicted RBP8.4□□□□□ -1.06
CHD4-208ENST00000540960 MSI1O43347 362 aaKnown RBP8.4□□□□□ -1.06
CHD4-208ENST00000540960 TIMM44O43615 452 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 MAFKO60675 156 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 DXOO77932 396 aaKnown RBP8.4□□□□□ -1.06
CHD4-208ENST00000540960 USP1O94782 785 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 MT-CO3P00414 261 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 APODP05090 189 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 CYP17A1P05093 508 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 HOXB2P14652 356 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 VAV1P15498 845 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 TACR2P21452 398 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 PSMB4P28070 264 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 CD6P30203 668 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 OR1E1P30953 314 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 CCT5P48643 541 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 PAPOLAP51003 745 aaKnown RBP8.4□□□□□ -1.06
CHD4-208ENST00000540960 ERVPABLB-1P60509 514 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 USP46P62068 366 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 ZXDBP98169 803 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 USP4Q13107 963 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 TMED2Q15363 201 aa8.4□□□□□ -1.06
CHD4-208ENST00000540960 ZSCAN26Q16670 478 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms