RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 IGHV4-34P06331 123 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 IVLP07476 585 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 ATXN1LP0C7T5 689 aaKnown RBP10.61□□□□□ -0.71
ATL3-204ENST00000540699 PGAM1P18669 254 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 STX2P32856 288 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 HOXD12P35452 270 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 PTGER3P43115 390 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 CRADDP78560 199 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 ITKQ08881 620 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 TRAF2Q12933 501 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 EFTUD2Q15029 972 aaKnown RBP eCLIP10.61□□□□□ -0.71
ATL3-204ENST00000540699 CERCAMQ5T4B2 595 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 ARMC3Q5W041 872 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 KIAA0895LQ68EN5 471 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 TMEM135Q86UB9 458 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 TRIM69Q86WT6 500 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 TMEFF1Q8IYR6 380 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 RIBC1Q8N443 379 aaPredicted RBP10.61□□□□□ -0.71
ATL3-204ENST00000540699 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.61□□□□□ -0.71
ATL3-204ENST00000540699 GOLGA6L1Q8N7Z2 621 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 OR14C36Q8NHC7 312 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 C1orf216Q8TAB5 229 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 GSDMBQ8TAX9 411 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 CFAP36Q96G28 342 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 FEM1CQ96JP0 617 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 ATP6V1G3Q96LB4 118 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 TRIB3Q96RU7 358 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 CCDC77Q9BR77 488 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 ORAI3Q9BRQ5 295 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 IL22Q9GZX6 179 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 MOCS1Q9NZB8 636 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 SLC24A2Q9UI40 661 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 SOX13Q9UN79 622 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.61□□□□□ -0.71
ATL3-204ENST00000540699 PPIL1Q9Y3C6 166 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 PCDHGA5Q9Y5G8 931 aa10.61□□□□□ -0.71
ATL3-204ENST00000540699 SCN8AQ9UQD0 1980 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 FAM237BA0A1B0GVD1 139 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 EXOC1LA0A1B0GW35 172 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 GOLGA6L10A6NI86 522 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 FAM159BA6NKW6 160 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 UPK3BL1B0FP48 263 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 HMGB1P1B2RPK0 211 aaPredicted RBP10.6□□□□□ -0.71
ATL3-204ENST00000540699 UPK3BL2E5RIL1 263 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 TSPAN6O43657 245 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 GDF9O60383 454 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 CDH16O75309 829 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 PGLSO95336 258 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 EPOP01588 193 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 SERPINF2P08697 491 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 NUDT1P36639 197 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 DPP6P42658 865 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 CHRNA4P43681 627 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 SLCO1A2P46721 670 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 RPL26P61254 145 aaKnown RBP10.6□□□□□ -0.71
ATL3-204ENST00000540699 CRYMQ14894 314 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 SLC1A5Q15758 541 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 UGP2Q16851 508 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 KLHL38Q2WGJ6 581 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 TMEM259Q4ZIN3 620 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 SPANXN3Q5MJ09 141 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 LYSMD4Q5XG99 296 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 ZNF449Q6P9G9 518 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 FBXL19Q6PCT2 694 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 DNAAF3Q8N9W5 541 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 SLC44A1Q8WWI5 657 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 BIRC7Q96CA5 298 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 HSPA12BQ96MM6 686 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 FCRL3Q96P31 734 aaPredicted RBP10.6□□□□□ -0.71
ATL3-204ENST00000540699 CYTH2Q99418 400 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 KIFC1Q9BW19 673 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 FSD1LQ9BXM9 530 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 TDRD1Q9BXT4 1180 aaKnown RBP10.6□□□□□ -0.71
ATL3-204ENST00000540699 MRM3Q9HC36 420 aaKnown RBP10.6□□□□□ -0.71
ATL3-204ENST00000540699 SMYD2Q9NRG4 433 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 CTNNAL1Q9UBT7 734 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 PILRBQ9UKJ0 227 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 RPL26L1Q9UNX3 145 aaKnown RBP10.6□□□□□ -0.71
ATL3-204ENST00000540699 PCDHGC4Q9Y5F7 938 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 RAI2Q9Y5P3 530 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 MAD1L1Q9Y6D9 718 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 CABIN1Q9Y6J0 2220 aa10.6□□□□□ -0.71
ATL3-204ENST00000540699 ADAMTS9Q9P2N4 1935 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 ZCWPW2A0A1B0GU75 182 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 TLDC2A0PJX2 215 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 MAGEB16A2A368 324 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 SMIM23A6NLE4 172 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 CXorf49A8MYA2 514 aaPredicted RBP10.59□□□□□ -0.71
ATL3-204ENST00000540699 FOXD2O60548 495 aaPredicted RBP10.59□□□□□ -0.71
ATL3-204ENST00000540699 USP1O94782 785 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 PRLP01236 227 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 TPH1P17752 444 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 HLA-DPA1P20036 260 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 CA4P22748 312 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 ITPKAP23677 461 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 MMP12P39900 470 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 DHPSP49366 369 aaPredicted RBP10.59□□□□□ -0.71
ATL3-204ENST00000540699 PPP2CBP62714 309 aa10.59□□□□□ -0.71
ATL3-204ENST00000540699 POLR2LP62875 67 aaKnown RBP10.59□□□□□ -0.71
ATL3-204ENST00000540699 PPP2CAP67775 309 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms