RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PCSK1NQ9UHG2 260 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 EVPLQ92817 2033 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 C7orf72A4D263 438 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 TCAF2A6NFQ2 919 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 AQP12BA6NM10 295 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 ERI2A8K979 691 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 PIK3R2O00459 728 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 AIM2O14862 343 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 ATXN7O15265 892 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 INPPL1O15357 1258 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 SNAP91O60641 907 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 CILPO75339 1184 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 FBXO24O75426 580 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 SERPINB7O75635 380 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 RNASEH2AO75792 299 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 DNAJB5O75953 348 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 METTL18O95568 372 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 INHBBP09529 407 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 ATP6V1B1P15313 513 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 EPCAMP16422 314 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 JUNBP17275 347 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 DCKP27707 260 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 NPY2RP49146 381 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 GLUD2P49448 558 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 NUDT2P50583 147 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 ATP4BP51164 291 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 CLCN4P51793 760 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 LIMK2P53671 638 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 NME5P56597 212 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 DNAJB13P59910 316 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 MRPS22P82650 360 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 MPP1Q00013 466 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 MS4A2Q01362 244 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 PLOD1Q02809 727 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 SLC9B1Q4ZJI4 515 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 ZNF667Q5HYK9 610 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 NHSL2Q5HYW2 709 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 SNAP47Q5SQN1 464 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 C6orf52Q5T4I8 152 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 LIPMQ5VYY2 423 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 NIPAL1Q6NVV3 410 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 NPNTQ6UXI9 565 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 ZYG11AQ6WRX3 759 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 NCCRP1Q6ZVX7 275 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 CHSY3Q70JA7 882 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 FKBP9P1Q75LS8 142 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 AMIGO2Q86SJ2 522 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM110Q86TL2 294 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM135Q86UB9 458 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 SNX32Q86XE0 403 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 CAMK1DQ8IU85 385 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 AQP12AQ8IXF9 295 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 LRRC71Q8N4P6 559 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 LEMD2Q8NC56 503 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 GIPC3Q8TF64 312 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 TRUB1Q8WWH5 349 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 PRPF31Q8WWY3 499 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 ABTB1Q969K4 478 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 SLC35B4Q969S0 331 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 EME1Q96AY2 570 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 EFHD2Q96C19 240 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 MAELQ96JY0 434 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 ZBTB45Q96K62 511 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 DNAJC1Q96KC8 554 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 PEBP4Q96S96 227 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 RBBP8Q99708 897 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 OLFM1Q99784 485 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 ACO2Q99798 780 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 SLX1AQ9BQ83 275 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 MCMBPQ9BTE3 642 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 GATA5Q9BWX5 397 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 GSX2Q9BZM3 304 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 BRD8Q9H0E9 1235 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 MUC13Q9H3R2 512 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 COQ10BQ9H8M1 238 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 LRRC40Q9H9A6 602 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 NMRAL1Q9HBL8 299 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 WDR6Q9NNW5 1121 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 MRPL17Q9NRX2 175 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 FAM105AQ9NUU6 356 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 UBP1Q9NZI7 540 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 CD300AQ9UGN4 299 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 CYTH4Q9UIA0 394 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 FBXL21Q9UKT6 434 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 HCN2Q9UL51 889 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 G3BP2Q9UN86 482 aaKnown RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 CDYLQ9Y232 598 aa7.67□□□□□ -1.18
CCDC60-204ENST00000539847 ZFP37Q9Y6Q3 630 aaPredicted RBP7.67□□□□□ -1.18
CCDC60-204ENST00000539847 MYH9P35579 1960 aaKnown RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 DMDP11532 3685 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 DCDC2BA2VCK2 349 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 KHNYNO15037 678 aaKnown RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 TRIM24O15164 1050 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 PSMD3O43242 534 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 GRID2O43424 1007 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 HTRA2O43464 458 aaPredicted RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 MAN1A2O60476 641 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 MMP20O60882 483 aa7.66□□□□□ -1.18
CCDC60-204ENST00000539847 MAFO75444 373 aaPredicted RBP7.66□□□□□ -1.18
CCDC60-204ENST00000539847 DDHD2O94830 711 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms