RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 RAB44Q7Z6P3 723 aaPredicted RBP24.84■■□□□ 1.57
RAB40C-204ENST00000538492 NPAS4Q8IUM7 802 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 APLFQ8IW19 511 aaPredicted RBP24.84■■□□□ 1.57
RAB40C-204ENST00000538492 LPCAT1Q8NF37 534 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 TRPC4APQ8TEL6 797 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 SCUBE2Q9NQ36 999 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 KDELR3O43731 214 aa24.83■■□□□ 1.57
RAB40C-204ENST00000538492 SRP72O76094 671 aaKnown RBP24.83■■□□□ 1.57
RAB40C-204ENST00000538492 INHAP05111 366 aa24.83■■□□□ 1.57
RAB40C-204ENST00000538492 RARS2Q5T160 578 aaKnown RBP24.83■■□□□ 1.57
RAB40C-204ENST00000538492 PIDD1Q9HB75 910 aa24.83■■□□□ 1.57
RAB40C-204ENST00000538492 IKZF3Q9UKT9 509 aa24.83■■□□□ 1.57
RAB40C-204ENST00000538492 MED16Q9Y2X0 877 aa24.83■■□□□ 1.57
RAB40C-204ENST00000538492 A0A0U1RQS6 177 aa24.83■■□□□ 1.56
RAB40C-204ENST00000538492 ZNF840PA6NDX5 716 aa24.83■■□□□ 1.56
RAB40C-204ENST00000538492 MRASO14807 208 aa24.83■■□□□ 1.56
RAB40C-204ENST00000538492 PRLP01236 227 aa24.83■■□□□ 1.56
RAB40C-204ENST00000538492 RHOCP08134 193 aa24.83■■□□□ 1.56
RAB40C-204ENST00000538492 HOXB8P17481 243 aaPredicted RBP24.83■■□□□ 1.56
RAB40C-204ENST00000538492 CORO1AP31146 461 aaKnown RBP24.83■■□□□ 1.56
RAB40C-204ENST00000538492 C2orf15Q8WU43 125 aaKnown RBP24.83■■□□□ 1.56
RAB40C-204ENST00000538492 PKP2Q99959 881 aa24.83■■□□□ 1.56
RAB40C-204ENST00000538492 SLC39A3Q9BRY0 314 aa24.83■■□□□ 1.56
RAB40C-204ENST00000538492 UNC93B1Q9H1C4 597 aa24.83■■□□□ 1.56
RAB40C-204ENST00000538492 POPDC3Q9HBV1 291 aa24.83■■□□□ 1.56
RAB40C-204ENST00000538492 ANKRD36A6QL64 1941 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 ENO4A6NNW6 628 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 SUPT3HB4E1H0 165 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 SCAMP3O14828 347 aaKnown RBP24.82■■□□□ 1.56
RAB40C-204ENST00000538492 SUPT3HO75486 399 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 KIF19Q2TAC6 998 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 SETMARQ53H47 684 aaPredicted RBP24.82■■□□□ 1.56
RAB40C-204ENST00000538492 DDIASQ8IXT1 998 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 RHEBL1Q8TAI7 183 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 LPGAT1Q92604 370 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 ASB9Q96DX5 294 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 CCDC68Q9H2F9 335 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 MRGBPQ9NV56 204 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 INTS10Q9NVR2 710 aaKnown RBP24.82■■□□□ 1.56
RAB40C-204ENST00000538492 GALPQ9UBC7 116 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 AGO1Q9UL18 857 aaKnown RBP24.82■■□□□ 1.56
RAB40C-204ENST00000538492 A0A1B0GTL3 188 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 PIP5K1BO14986 540 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 NDUFS3O75489 264 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 MTA1Q13330 715 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 HECTD3Q5T447 861 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 LINGO4Q6UY18 593 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 TWIST2Q8WVJ9 160 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 DLG3Q92796 817 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 CDK5RAP1Q96SZ6 601 aaKnown RBP24.82■■□□□ 1.56
RAB40C-204ENST00000538492 SLC25A23Q9BV35 468 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 TDRD1Q9BXT4 1180 aaKnown RBP24.82■■□□□ 1.56
RAB40C-204ENST00000538492 TFB2MQ9H5Q4 396 aaKnown RBP24.82■■□□□ 1.56
RAB40C-204ENST00000538492 TAS2R13Q9NYV9 303 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 RIMKLBQ9ULI2 386 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 RNF112Q9ULX5 631 aa24.82■■□□□ 1.56
RAB40C-204ENST00000538492 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 PRORSD1PA6NEY8 169 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 NRP2O60462 931 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 CLASP2O75122 1294 aaKnown RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 CLDN11O75508 207 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 CR2P20023 1033 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 ZNF177Q13360 481 aaPredicted RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 TRIM25Q14258 630 aaKnown RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 PDK3Q15120 406 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 FUNDC1Q8IVP5 155 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 SEPT8Q92599 483 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 WBP2Q969T9 261 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 GBP5Q96PP8 586 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 BPIFA1Q9NP55 256 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 NCF1BA6NI72 391 aaPredicted RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 NCF1CA8MVU1 366 aaPredicted RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 AZIN1O14977 448 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 STC2O76061 302 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 NCF1P14598 390 aaPredicted RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 HOXD10P28358 340 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 EEF1DP29692 281 aaKnown RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 STX1BP61266 288 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 CYTH1Q15438 398 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 TAF1AQ15573 450 aaPredicted RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 TSNQ15631 228 aaKnown RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 AFTPHQ6ULP2 937 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 EFHBQ8N7U6 833 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 ATP6V1E2Q96A05 226 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 GPR21Q99679 349 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 SPAG4Q9NPE6 437 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 SEMA4BQ9NPR2 832 aaPredicted RBP24.81■■□□□ 1.56
RAB40C-204ENST00000538492 EPS15L1Q9UBC2 864 aa24.81■■□□□ 1.56
RAB40C-204ENST00000538492 LAMA2P24043 3122 aaKnown RBP24.8■■□□□ 1.56
RAB40C-204ENST00000538492 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.8■■□□□ 1.56
RAB40C-204ENST00000538492 C2orf81A6NN90 581 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 TLR1Q15399 786 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 SCLYQ96I15 445 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 BTBD9Q96Q07 612 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 TSC22D3Q99576 134 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 MUC3BQ9H195 1237 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 SYTL2Q9HCH5 934 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 BTRCQ9Y297 605 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 GBF1Q92538 1859 aa24.8■■□□□ 1.56
RAB40C-204ENST00000538492 PRSS51A0A1B0GVH4 220 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms