RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	CCDC185	Q8N715	623 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	KCTD6	Q8NC69	237 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	TRIM58	Q8NG06	486 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	FAM71B	Q8TC56	605 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	TEKT4	Q8WW24	435 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	WBP2	Q969T9	261 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	TBC1D31	Q96DN5	1066 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	C1orf74	Q96LT6	269 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	KCNC2	Q96PR1	638 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	XPO6	Q96QU8	1125 aa	Known RBP	4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	FOXB1	Q99853	325 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	P2RY13	Q9BPV8	354 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	SNRNP25	Q9BV90	132 aa	Known RBP	4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	CALN1	Q9BXU9	219 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	SLC2A11	Q9BYW1	496 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZYG11B	Q9C0D3	744 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	DHX35	Q9H5Z1	703 aa	Known RBP	4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	CATSPERB	Q9H7T0	1116 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZMAT4	Q9H898	229 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	MED4	Q9NPJ6	270 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	HPS4	Q9NQG7	708 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	HEBP1	Q9NRV9	189 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	DNAJC17	Q9NVM6	304 aa	Known RBP	4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	DDX56	Q9NY93	547 aa	Known RBP	4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	PLK2	Q9NYY3	685 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	VPS18	Q9P253	973 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	WNT16	Q9UBV4	365 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	TRIM10	Q9UDY6	481 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	XPO7	Q9UIA9	1087 aa	Known RBP	4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	STOML2	Q9UJZ1	356 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	CDC42EP3	Q9UKI2	254 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	VANGL2	Q9ULK5	521 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	FZD10	Q9ULW2	581 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	CA14	Q9ULX7	337 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	HS3ST4	Q9Y661	456 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	DUSP10	Q9Y6W6	482 aa		4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.4	□□□□□ -1.71
SNHG1-208	ENST00000538266	CDH23	Q9H251	3354 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	IGLV3-10	A0A075B6K4	115 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	GOLGA6L7	A0A1B0GV03	622 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	GRID2IP	A4D2P6	1211 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	TBC1D3B	A6NDS4	549 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	OTOL1	A6NHN0	477 aa	Predicted RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	MIF4GD	A9UHW6	222 aa	Known RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	EEF2K	O00418	725 aa	Known RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	NCAM2	O15394	837 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	TULP3	O75386	442 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	CLDN11	O75508	207 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	PALM	O75781	387 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	LUC7L3	O95232	432 aa	Known RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	KAT7	O95251	611 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	FTCD	O95954	541 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	PENK	P01210	267 aa	Predicted RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	PRL	P01236	227 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	APOD	P05090	189 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	IL1R2	P27930	398 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	HOXD9	P28356	352 aa	Predicted RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	OR1E1	P30953	314 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	SERPINB6	P35237	376 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	ACTN2	P35609	894 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	EIF2D	P41214	584 aa	Known RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	CDH4	P55283	916 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	CDH6	P55285	790 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZXDA	P98168	799 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	SLC25A11	Q02978	314 aa	Known RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	KDSR	Q06136	332 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	CKAP4	Q07065	602 aa	Known RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	SIGLEC14	Q08ET2	396 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	STAT4	Q14765	748 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	UBXN2B	Q14CS0	331 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	PDK2	Q15119	407 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	E2F5	Q15329	346 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	DPYSL2	Q16555	572 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	RAB6C	Q53S08	254 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	KCNT1	Q5JUK3	1230 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	RNF219	Q5W0B1	726 aa	Predicted RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	KANK2	Q63ZY3	851 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	GRAMD4	Q6IC98	578 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	RHBDF2	Q6PJF5	856 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	RFX8	Q6ZV50	586 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	CHST9	Q7L1S5	443 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	ANKS1B	Q7Z6G8	1248 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	TFAP2D	Q7Z6R9	452 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	SRL	Q86TD4	932 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	SETD3	Q86TU7	594 aa	Predicted RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	CIR1	Q86X95	450 aa	Predicted RBP	4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZNF354C	Q86Y25	554 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	PYROXD2	Q8N2H3	581 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	CARNMT1	Q8N4J0	409 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	KLHL36	Q8N4N3	616 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	ARFGAP1	Q8N6T3	406 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	UBL4B	Q8N7F7	174 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZNF610	Q8N9Z0	462 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	CCDC26	Q8TAB7	109 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	UCMA	Q8WVF2	138 aa		4.39	□□□□□ -1.71
SNHG1-208	ENST00000538266	FAM3C	Q92520	227 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms