RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 TBC1D14Q9P2M4 693 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 GLYATL1P3A0A0U1RQE8 302 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 C9IYK1 514 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 H0Y858 1186 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 TRIM38O00635 465 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 ERAL1O75616 437 aaKnown RBP10.06□□□□□ -0.8
GGA3-201ENST00000537686 FGBP02675 491 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 CXCR2P25025 360 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 SERPINB1P30740 379 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 GJA9P57773 515 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 C1DQ13901 141 aaKnown RBP10.06□□□□□ -0.8
GGA3-201ENST00000537686 INTS11Q5TA45 600 aaKnown RBP10.06□□□□□ -0.8
GGA3-201ENST00000537686 LYPLAL1Q5VWZ2 237 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 TAPT1Q6NXT6 567 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 ZCCHC8Q6NZY4 707 aaKnown RBP10.06□□□□□ -0.8
GGA3-201ENST00000537686 UBE2R2Q712K3 238 aaPredicted RBP10.06□□□□□ -0.8
GGA3-201ENST00000537686 AMIGO2Q86SJ2 522 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 GSTCDQ8NEC7 633 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 PTCD2Q8WV60 388 aaKnown RBP10.06□□□□□ -0.8
GGA3-201ENST00000537686 PTCD3Q96EY7 689 aaKnown RBP10.06□□□□□ -0.8
GGA3-201ENST00000537686 HBEGFQ99075 208 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 HTATIP2Q9BUP3 242 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 SLC39A8Q9C0K1 460 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 EPS8L2Q9H6S3 715 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 TMEM216Q9P0N5 145 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 FZD10Q9ULW2 581 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 ADAMTS5Q9UNA0 930 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 MYRFQ9Y2G1 1151 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 TIMM22Q9Y584 194 aa10.06□□□□□ -0.8
GGA3-201ENST00000537686 IQCF5A8MTL0 148 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 ISM1B1AKI9 464 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 F2P00734 622 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 NOS3P29474 1203 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 CYP20A1Q6UW02 462 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 VN1R5Q7Z5H4 357 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 KRT73Q86Y46 540 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 ADHFE1Q8IWW8 467 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 KIAA2013Q8IYS2 634 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 CD101Q93033 1021 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 PANX1Q96RD7 426 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 NDEL1Q9GZM8 345 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 TMCO1Q9UM00 188 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 ZNF510Q9Y2H8 683 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 GPSM3Q9Y4H4 160 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 ARIH1Q9Y4X5 557 aaPredicted RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 ZFP37Q9Y6Q3 630 aaPredicted RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 A0A0U1RQF3 1178 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 GRM6O15303 877 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 HCRTO43612 131 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 FAM20BO75063 409 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 KRT8P05787 483 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 C8AP07357 584 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 EPORP19235 508 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 NAA20P61599 178 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 TRIM16LQ309B1 348 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 ZIK1Q3SY52 487 aaPredicted RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 IRGCQ6NXR0 463 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 FITM2Q8N6M3 262 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 NIPA2Q8N8Q9 360 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 ASZ1Q8WWH4 475 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 NLNQ9BYT8 704 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 KRCC1Q9NPI7 259 aaPredicted RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 ZNF180Q9UJW8 692 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 COL11A2P13942 1736 aaPredicted RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 A0A088AWK7 358 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 NRP1O14786 923 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 NRP2O60462 931 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 SNUPNO95149 360 aaKnown RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 PRAMEF1O95521 474 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 AMD1P17707 334 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 ZNF10P21506 573 aaPredicted RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 ITPKAP23677 461 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 HTR1BP28222 390 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 SKP1P63208 163 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 SPIDRQ14159 915 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 TSTD2Q5T7W7 516 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 VWA5B1Q5TIE3 1220 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 DCAF12L1Q5VU92 463 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 GDF6Q6KF10 455 aaPredicted RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 CASP12Q6UXS9 341 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 NET1Q7Z628 596 aaPredicted RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 CLVS1Q8IUQ0 354 aaPredicted RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 REM2Q8IYK8 340 aaPredicted RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 SETD9Q8NE22 299 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 ING5Q8WYH8 240 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 CLP1Q92989 425 aaKnown RBP10.05□□□□□ -0.8
GGA3-201ENST00000537686 TLCD1Q96CP7 247 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 NPAS2Q99743 824 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 APOL4Q9BPW4 351 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 SRRDQ9UH36 339 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 SIX4Q9UIU6 781 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 AP3M1Q9Y2T2 418 aa10.05□□□□□ -0.8
GGA3-201ENST00000537686 KIAA1551Q9HCM1 1747 aa10.04□□□□□ -0.8
GGA3-201ENST00000537686 NPEPPSL1A6NEC2 478 aa10.04□□□□□ -0.8
GGA3-201ENST00000537686 IDO1P14902 403 aa10.04□□□□□ -0.8
GGA3-201ENST00000537686 NTSP30990 170 aa10.04□□□□□ -0.8
GGA3-201ENST00000537686 GJA5P36382 358 aa10.04□□□□□ -0.8
GGA3-201ENST00000537686 GRIA1P42261 906 aa10.04□□□□□ -0.8
GGA3-201ENST00000537686 MAPKAPK2P49137 400 aa10.04□□□□□ -0.8
GGA3-201ENST00000537686 CDH4P55283 916 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms