RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 OR4D1Q15615 310 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 CHSY3Q70JA7 882 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 TTC30BQ8N4P2 665 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 ADAMTS19Q8TE59 1207 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 USP13Q92995 863 aaPredicted RBP15.62■□□□□ 0.09
MKS1-204ENST00000537529 RCN3Q96D15 328 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 SLC22A12Q96S37 553 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 CRISPLD2Q9H0B8 497 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 S100A14Q9HCY8 104 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 VPS51Q9UID3 782 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 FKBPLQ9UIM3 349 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 ASB3Q9Y575 518 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 OR51B4Q9Y5P0 310 aa15.62■□□□□ 0.09
MKS1-204ENST00000537529 LCHNA4D1U4 455 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 GFRA2O00451 464 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 SCAMP3O14828 347 aaKnown RBP15.61■□□□□ 0.09
MKS1-204ENST00000537529 GREM1O60565 184 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 KERAO60938 352 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 VPS26AO75436 327 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 HDCP19113 662 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 AP1S1P61966 158 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 CCNIQ14094 377 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 MAPRE2Q15555 327 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 TXNDC8Q6A555 127 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 BNC2Q6ZN30 1099 aaPredicted RBP15.61■□□□□ 0.09
MKS1-204ENST00000537529 HPS6Q86YV9 775 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 MFN1Q8IWA4 741 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 GPR65Q8IYL9 337 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 DSELQ8IZU8 1212 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 SHKBP1Q8TBC3 707 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 KIAA1191Q96A73 305 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 ATOH8Q96SQ7 321 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 ZBED2Q9BTP6 218 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 EFCAB1Q9HAE3 211 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 IL21Q9HBE4 155 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 TNFRSF12AQ9NP84 129 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 POMPQ9Y244 141 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 OAS3Q9Y6K5 1087 aaKnown RBP15.61■□□□□ 0.09
MKS1-204ENST00000537529 LTBP2Q14767 1821 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 H3BMM5 538 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 UBXN8O00124 270 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 UBFD1O14562 309 aaKnown RBP15.61■□□□□ 0.09
MKS1-204ENST00000537529 UBDO15205 165 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 TEX28O15482 410 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 EFCAB14O75071 495 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 GFAPP14136 432 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 C1QTNF8P60827 252 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 PTPRNQ16849 979 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 ZRANB3Q5FWF4 1079 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 TRIM68Q6AZZ1 485 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 PAQR3Q6TCH7 311 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 ADGRG6Q86SQ4 1221 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 FAM217AQ8IXS0 508 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 PGAM4Q8N0Y7 254 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 NKAPQ8N5F7 415 aaKnown RBP15.61■□□□□ 0.09
MKS1-204ENST00000537529 MAB21L3Q8N8X9 362 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 STAG3L4Q8TBR4 150 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 FAM136AQ96C01 138 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 SMIM14Q96QK8 99 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 BATF3Q9NR55 127 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 RNF112Q9ULX5 631 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 FAM50BQ9Y247 325 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 FCF1Q9Y324 198 aaKnown RBP15.61■□□□□ 0.09
MKS1-204ENST00000537529 PLXNA4Q9HCM2 1894 aa15.61■□□□□ 0.09
MKS1-204ENST00000537529 ANKRD36A6QL64 1941 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 SUPT3HB4E1H0 165 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 H7C0S8 307 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 SUPT3HO75486 399 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 BAG2O95816 211 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 HSPA1AP0DMV8 641 aaKnown RBP15.6■□□□□ 0.09
MKS1-204ENST00000537529 HSPA1BP0DMV9 641 aaKnown RBP15.6■□□□□ 0.09
MKS1-204ENST00000537529 PKMP14618 531 aaKnown RBP15.6■□□□□ 0.09
MKS1-204ENST00000537529 ERFP50548 548 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 WDR5P61964 334 aaKnown RBP15.6■□□□□ 0.09
MKS1-204ENST00000537529 ART3Q13508 389 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 PFKFB4Q16877 469 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 TCHHL1Q5QJ38 904 aaPredicted RBP15.6■□□□□ 0.09
MKS1-204ENST00000537529 SLC26A7Q8TE54 656 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 MRPS31Q92665 395 aaKnown RBP15.6■□□□□ 0.09
MKS1-204ENST00000537529 MYO19Q96H55 970 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 TTC1Q99614 292 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 GPR21Q99679 349 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 C2orf49Q9BVC5 232 aaPredicted RBP15.6■□□□□ 0.09
MKS1-204ENST00000537529 DNMT3BQ9UBC3 853 aaKnown RBP15.6■□□□□ 0.09
MKS1-204ENST00000537529 STK39Q9UEW8 545 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 PPM1HQ9ULR3 514 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 MED16Q9Y2X0 877 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 PKP3Q9Y446 797 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 ZNF711Q9Y462 761 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 COMMD10Q9Y6G5 202 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 CEP350Q5VT06 3117 aa15.6■□□□□ 0.09
MKS1-204ENST00000537529 SYCE1LA8MT33 242 aa15.59■□□□□ 0.09
MKS1-204ENST00000537529 GPC4O75487 556 aa15.59■□□□□ 0.09
MKS1-204ENST00000537529 CD1EP15812 388 aa15.59■□□□□ 0.09
MKS1-204ENST00000537529 CD9P21926 228 aa15.59■□□□□ 0.09
MKS1-204ENST00000537529 HTRA3P83110 453 aa15.59■□□□□ 0.09
MKS1-204ENST00000537529 ATXN7L2Q5T6C5 722 aaPredicted RBP15.59■□□□□ 0.09
MKS1-204ENST00000537529 PSAPL1Q6NUJ1 521 aa15.59■□□□□ 0.09
MKS1-204ENST00000537529 RETSATQ6NUM9 610 aa15.59■□□□□ 0.09
MKS1-204ENST00000537529 CLYBLQ8N0X4 340 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms