RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 RIPK3Q9Y572 518 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 KCNE2Q9Y6J6 123 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF99A8MXY4 864 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 MEN1O00255 615 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 DPYSL3Q14195 570 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 PCLAFQ15004 111 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 LY6KQ17RY6 165 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 TBRG1Q3YBR2 411 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF484Q5JVG2 852 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 DARS2Q6PI48 645 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 ENOSF1Q7L5Y1 443 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 THAP5Q7Z6K1 395 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 FEZF2Q8TBJ5 459 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 SGCDQ92629 289 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 WDR83Q9BRX9 315 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 POLR3FQ9H1D9 316 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 TRMT6Q9UJA5 497 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 NOSIPQ9Y314 301 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 CROCCQ5TZA2 2017 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 PNMA8CA0A1B0GUJ8 204 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 EI24O14681 340 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 ANGPT2O15123 496 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 STX7O15400 261 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 SLC4A1P02730 911 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 PTPN7P35236 360 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 TFAMQ00059 246 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 SLC35G1Q2M3R5 365 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 LYPD8Q6UX82 237 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 ADGRF2Q8IZF7 708 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF781Q8N8C0 355 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 TTLQ8NG68 377 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 CANT1Q8WVQ1 401 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 BTN2A3PQ96KV6 586 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 C1QTNF7Q9BXJ2 289 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 DPEP3Q9H4B8 488 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 TBC1D13Q9NVG8 400 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 A0A1B0GUL6 1792 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 IGKV6D-41A0A0C4DH26 115 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 TCRBV7S3A2A0A539 114 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 H3BMM5 538 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 CHADO15335 359 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 PRKCHP24723 683 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 ABCG1P45844 678 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 ACTR2P61160 394 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 YIF1BQ5BJH7 314 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 GLRA4Q5JXX5 417 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 STEAP3Q658P3 488 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 RFX6Q8HWS3 928 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 HEXIM2Q96MH2 286 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 MCMBPQ9BTE3 642 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 MSTO1Q9BUK6 570 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 R3HDMLQ9H3Y0 253 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 IL37Q9NZH6 218 aa10.87□□□□□ -0.67
CLSTN3-207ENST00000537408 A0A1W2PRG6 482 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 GPR182O15218 404 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 ARNTP27540 789 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 TALDO1P37837 337 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 LSM3P62310 102 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 ROR1Q01973 937 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 IGSF11Q5DX21 431 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 COLEC12Q5KU26 742 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 FAM182AQ5T1J6 154 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 TMEM236Q5W0B7 351 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 BBS12Q6ZW61 710 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 VSIG10LQ86VR7 867 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 P2RY8Q86VZ1 359 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 THNSL1Q8IYQ7 743 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 XXYLT1Q8NBI6 393 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 SMG8Q8ND04 991 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF555Q8NEP9 628 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 WDR55Q9H6Y2 383 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 TM9SF3Q9HD45 589 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 DMAC2Q9NW81 257 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 OAZ3Q9UMX2 235 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 LAMB1P07942 1786 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 TYW5A2RUC4 315 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 CXorf49A8MYA2 514 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 PIK3R2O00459 728 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 TYK2P29597 1187 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 GABARAPL2P60520 117 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 HADHQ16836 314 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 SLC2A14Q8TDB8 520 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 SLC45A3Q96JT2 553 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 KREMEN1Q96MU8 473 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 ZBTB26Q9HCK0 441 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 CCM2LQ9NUG4 571 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 AQP12BA6NM10 295 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 ARVCFO00192 962 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 ZNF195O14628 629 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 CST8O60676 142 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 DGAT1O75907 488 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 SLITRK5O94991 958 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 PSMC6P62333 389 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 GBE1Q04446 702 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 PON2Q15165 354 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 RAB30Q15771 203 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 ATP13A4Q4VNC1 1196 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 SLFN12LQ6IEE8 588 aa10.86□□□□□ -0.67
CLSTN3-207ENST00000537408 DPY19L3Q6ZPD9 716 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms