RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SLC23A1Q9UHI7 598 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 XPO7Q9UIA9 1087 aaKnown RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 INVSQ9Y283 1065 aa3.73□□□□□ -1.81
MCF2-210ENST00000536274 FCF1Q9Y324 198 aaKnown RBP3.73□□□□□ -1.81
MCF2-210ENST00000536274 ATAD5Q96QE3 1844 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ISPDA4D126 451 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 PRORSD1PA6NEY8 169 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 HNRNPCL2B2RXH8 293 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TMEM233B4DJY2 109 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 M0R3G1 203 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CAPN5O15484 640 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 LIASO43766 372 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 PLA2G6O60733 806 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ZNF780AO75290 641 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 MED24O75448 989 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SLITRK5O94991 958 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 LYPLA2O95372 231 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 NDST3O95803 873 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 NPPAP01160 153 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CSF2P04141 144 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 GSNP06396 782 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 HTR1AP08908 422 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 HSMCR30P0CW71 290 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TAL1P17542 331 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 M6PRP20645 277 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 KELP23276 732 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 GSTM2P28161 218 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 IL12AP29459 219 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 HTR3AP46098 478 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CAPZA2P47755 286 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 HSPA13P48723 471 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CRADDP78560 199 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 KLF1Q13351 362 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 AP3B2Q13367 1082 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TOP3AQ13472 1001 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 ART3Q13508 389 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 NR6A1Q15406 480 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TAB1Q15750 504 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CTF1Q16619 201 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 BRDTQ58F21 947 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 YIF1BQ5BJH7 314 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 N4BP2L1Q5TBK1 243 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 AGAP6Q5VW22 663 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 FAM160B1Q5W0V3 765 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 MAMDC4Q6UXC1 1216 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 NRARPQ7Z6K4 114 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SPPL2CQ8IUH8 684 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 OR10Z1Q8NGY1 313 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 DNAJB8Q8NHS0 232 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 VANGL1Q8TAA9 524 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 UBASH3BQ8TF42 649 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ZHX1-C8orf76Q96EF9 292 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CERS2Q96G23 380 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 RNF170Q96K19 258 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 AGAP4Q96P64 663 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SH2D3AQ9BRG2 576 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 REEP2Q9BRK0 252 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ZNF341Q9BYN7 854 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 GLTPQ9NZD2 209 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 POLLQ9UGP5 575 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 EMCNQ9ULC0 261 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 OGDHLQ9ULD0 1010 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 POLIQ9UNA4 740 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 COL11A1P12107 1806 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 IQANK1A0A1B0GTG1 560 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ZNF98A6NK75 572 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 VWA5AO00534 786 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SHOXO15266 292 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TGFB1I1O43294 461 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 XPNPEP2O43895 674 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 DEAF1O75398 565 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 BCAS2O75934 225 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 SEC14L2O76054 403 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 GOT2P00505 430 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 RNF224P0DH78 156 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 MTHFD1P11586 935 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 NCK1P16333 377 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CYP2A7P20853 494 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ATP6V1B2P21281 511 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 MYF6P23409 242 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TBXAS1P24557 533 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 AZGP1P25311 298 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 MPSTP25325 297 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 IL1R2P27930 398 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 EIF2DP41214 584 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 RCAN1P53805 252 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 GP2P55259 537 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 ERVFC1P60507 584 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 DAB2P98082 770 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 FMO1Q01740 532 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CSTF3Q12996 717 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 PPIL2Q13356 520 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 EFR3AQ14156 821 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 OCLNQ16625 522 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CA9Q16790 459 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 KNOP1Q1ED39 458 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 BTBD16Q32M84 506 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 PRR16Q569H4 304 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 MBLAC2Q68D91 279 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 DENND5AQ6IQ26 1287 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms