RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 ZNF711Q9Y462 761 aa13.51□□□□□ -0.25
RPAIN-205ENST00000536255 CABIN1Q9Y6J0 2220 aa13.51□□□□□ -0.25
RPAIN-205ENST00000536255 PCNX2A6NKB5 2137 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 CCDC188H7C350 402 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 TNFSF14O43557 240 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 TRIM16O95361 564 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 AGTP01019 485 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 CSF2P04141 144 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 PCCBP05166 539 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 ETS1P14921 441 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 NME1P15531 152 aaKnown RBP13.5□□□□□ -0.25
RPAIN-205ENST00000536255 TSHRP16473 764 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 GM2AP17900 193 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 DGKAP23743 735 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 RPL22P35268 128 aaKnown RBP13.5□□□□□ -0.25
RPAIN-205ENST00000536255 ETV3P41162 512 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 SHC2P98077 582 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 MTM1Q13496 603 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 SEMA5AQ13591 1074 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 PTK2BQ14289 1009 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 ZNF542PQ5EBM4 170 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 FAXCQ5TGI0 409 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 KCTD11Q693B1 232 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 ESRP1Q6NXG1 681 aaKnown RBP13.5□□□□□ -0.25
RPAIN-205ENST00000536255 Q6ZVL8 140 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 ZNF765Q7L2R6 523 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 LYSMD3Q7Z3D4 306 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 TECPR1Q7Z6L1 1165 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 NLRP8Q86W28 1048 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 TAB3Q8N5C8 712 aaPredicted RBP13.5□□□□□ -0.25
RPAIN-205ENST00000536255 EID2Q8N6I1 236 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
RPAIN-205ENST00000536255 BLOC1S5Q8TDH9 187 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 ARNT2Q9HBZ2 717 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
RPAIN-205ENST00000536255 WASF3Q9UPY6 502 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 SHOC2Q9UQ13 582 aa13.5□□□□□ -0.25
RPAIN-205ENST00000536255 COL5A1P20908 1838 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-205ENST00000536255 H3BM21 787 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 FANCGO15287 622 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 PIAS2O75928 621 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 ECEL1O95672 775 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 KRT14P02533 472 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 APRTP07741 180 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 C1SP09871 688 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 PIRTP0C851 137 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 HTR1BP28222 390 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 HMGCLP35914 325 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 CHRNA4P43681 627 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 SPINT3P49223 89 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 HNRNPKP61978 463 aaKnown RBP eCLIP13.49□□□□□ -0.25
RPAIN-205ENST00000536255 BASP1P80723 227 aaKnown RBP13.49□□□□□ -0.25
RPAIN-205ENST00000536255 PDE1BQ01064 536 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 DPTQ07507 201 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 EIF2B5Q13144 721 aaKnown RBP13.49□□□□□ -0.25
RPAIN-205ENST00000536255 INPP5AQ14642 412 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 PTPRRQ15256 657 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 CDKN3Q16667 212 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 ZDHHC20Q5W0Z9 365 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 TTC27Q6P3X3 843 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 MACC1Q6ZN28 852 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 GLT6D1Q7Z4J2 308 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 TMC3Q7Z5M5 1100 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 SLC25A45Q8N413 288 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 GLIS1Q8NBF1 620 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 AP2M1Q96CW1 435 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 SMIM14Q96QK8 99 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 CAAP1Q9H8G2 361 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 EIF2B3Q9NR50 452 aaKnown RBP13.49□□□□□ -0.25
RPAIN-205ENST00000536255 UCKL1Q9NWZ5 548 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 TOR4AQ9NXH8 423 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 PCYOX1Q9UHG3 505 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 PKP3Q9Y446 797 aa13.49□□□□□ -0.25
RPAIN-205ENST00000536255 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-205ENST00000536255 GOLGA8CPA6NN73 597 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 C2orf81A6NN90 581 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 AP3B1O00203 1094 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 CACNB4O00305 520 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-205ENST00000536255 PDE2AO00408 941 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-205ENST00000536255 USP12O75317 370 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 SUN1O94901 812 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 CRTAMO95727 393 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 LDOC1O95751 146 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-205ENST00000536255 SLC4A1P02730 911 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 ZSCAN5DPP0CG00 497 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 JUNDP17535 347 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 KELP23276 732 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 TEAD1P28347 426 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 GPR1P46091 355 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 DCDC1P59894 354 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 CDK16Q00536 496 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 CDH17Q12864 832 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 SPARCL1Q14515 664 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 PPP1R7Q15435 360 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 RAET1GQ6H3X3 334 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 PNCKQ6P2M8 343 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 PPP1R21Q6ZMI0 780 aa13.48□□□□□ -0.25
RPAIN-205ENST00000536255 RAB44Q7Z6P3 723 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-205ENST00000536255 PRUNE1Q86TP1 453 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms