RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TTC24A2A3L6 582 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 B4E171 279 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 HTRA2O43464 458 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ASMTLO95671 621 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TEAD1P28347 426 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MIPP30301 263 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TSPAN7P41732 249 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MMP13P45452 471 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 POLD2P49005 469 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 EPHB1P54762 984 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MYL5Q02045 173 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ITKQ08881 620 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 LRP8Q14114 963 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SEPT6Q14141 434 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 RALGPS1Q5JS13 557 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TMEM71Q6P5X7 295 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SASS6Q6UVJ0 657 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CEACAM20Q6UY09 585 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 Q6ZVL8 140 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 KDELC2Q7Z4H8 507 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 HSD11B1LQ7Z5J1 315 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NLGN4XQ8N0W4 816 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NLGN4YQ8NFZ3 816 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PMEPA1Q969W9 287 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PEBP4Q96S96 227 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CD84Q9UIB8 345 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 BSNQ9UPA5 3926 aa12.92□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NPIPB15A6NHN6 443 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PPM1DO15297 605 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PGLSO95336 258 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PRKAR1AP10644 381 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ATP1A3P13637 1013 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SLC2A4P14672 509 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CTPS1P17812 591 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 LHCGRP22888 699 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MAP4P27816 1152 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CSF2RBP32927 897 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MAPK9P45984 424 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 HCAR3P49019 387 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CDH6P55285 790 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MC1RQ01726 317 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TRAF2Q12933 501 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SKIDA1Q1XH10 827 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MARC1Q5VT66 337 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ANKS6Q68DC2 871 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PLEKHA7Q6IQ23 1121 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ZNF761Q86XN6 746 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 HSPH1Q92598 858 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SH3KBP1Q96B97 665 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ZNF653Q96CK0 615 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TRIM11Q96F44 468 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SCRN2Q96FV2 425 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ERGIC2Q96RQ1 377 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MGME1Q9BQP7 344 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ZPBPQ9BS86 351 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 EPN3Q9H201 632 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NOD2Q9HC29 1040 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MRPL47Q9HD33 250 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 OCIAD1Q9NX40 245 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CWC15Q9P013 229 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CNOT8Q9UFF9 292 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 LIMA1Q9UHB6 759 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ANAPC2Q9UJX6 822 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 DNPEPQ9ULA0 475 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 GTF3C3Q9Y5Q9 886 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 PTPN13Q12923 2485 aa12.91□□□□□ -0.34
TNFRSF1A-207ENST00000535958 UBR5O95071 2799 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TRBV23OR9-2A0A075B6M9 112 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 A8MU76 341 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 LRCH4O75427 683 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MAP3K6O95382 1288 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 NTRK1P04629 796 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ZNF30P17039 623 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 CA4P22748 312 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 FASLGP48023 281 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MAXP61244 160 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 HHEXQ03014 270 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 DPTQ07507 201 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SQSTM1Q13501 440 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 DPYSQ14117 519 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ASIC2Q16515 512 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SMTNL2Q2TAL5 461 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 LRRC66Q68CR7 880 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ADAMTSL4Q6UY14 1074 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TSPAN33Q86UF1 283 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SLC37A2Q8TED4 501 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 FNIP1Q8TF40 1166 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 SLC45A3Q96JT2 553 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TRIT1Q9H3H1 467 aaKnown RBP12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 ANO10Q9NW15 660 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TAS2R14Q9NYV8 317 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TMEM9Q9P0T7 183 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 MYO1AQ9UBC5 1043 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TMEM98Q9Y2Y6 226 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TTLL3Q9Y4R7 772 aa12.9□□□□□ -0.34
TNFRSF1A-207ENST00000535958 TMEM191CA6NGB0 347 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 FUCA1P04066 466 aa12.89□□□□□ -0.35
TNFRSF1A-207ENST00000535958 CR2P20023 1033 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms