RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 RPL26P61254 145 aaKnown RBP16.34■□□□□ 0.21
ATL3-202ENST00000535789 KIF5AQ12840 1032 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 TFDP2Q14188 446 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 TEX44Q53QW1 395 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 RAET1GQ6H3X3 334 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 BBS12Q6ZW61 710 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 EFL1Q7Z2Z2 1120 aaKnown RBP16.34■□□□□ 0.21
ATL3-202ENST00000535789 TRIM74Q86UV6 250 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 NT5DC3Q86UY8 548 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 ZC3H18Q86VM9 953 aaKnown RBP16.34■□□□□ 0.21
ATL3-202ENST00000535789 CCDC50Q8IVM0 306 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 DCBLD1Q8N8Z6 715 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 TEKT5Q96M29 485 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 HEMGNQ9BXL5 484 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 SLC25A51Q9H1U9 297 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 GLOD4Q9HC38 313 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 LZTFL1Q9NQ48 299 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 SIRPGQ9P1W8 387 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 RPL26L1Q9UNX3 145 aaKnown RBP16.34■□□□□ 0.21
ATL3-202ENST00000535789 PCDHB1Q9Y5F3 818 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 PCDHA3Q9Y5H8 950 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 ZFYVE26Q68DK2 2539 aa16.34■□□□□ 0.21
ATL3-202ENST00000535789 SRRM3A6NNA2 597 aaPredicted RBP16.33■□□□□ 0.2
ATL3-202ENST00000535789 FADS2P1A8MWK0 482 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 ESPNB1AK53 854 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 ANKRD66B4E2M5 251 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 F5H423 210 aaPredicted RBP16.33■□□□□ 0.2
ATL3-202ENST00000535789 TNFRSF10CO14798 259 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 KRT86O43790 486 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 ZRANB2O95218 330 aaKnown RBP eCLIP16.33■□□□□ 0.2
ATL3-202ENST00000535789 GP1BAP07359 652 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 ANXA6P08133 673 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 PIRTP0C851 137 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 CDK4P11802 303 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 NFKB1P19838 968 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 MSNP26038 577 aaKnown RBP16.33■□□□□ 0.2
ATL3-202ENST00000535789 POLD2P49005 469 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 NR2C2P49116 596 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 EPHB1P54762 984 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 NOMO1Q15155 1222 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 KDELC1Q6UW63 502 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 ZNF765Q7L2R6 523 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 LYSMD3Q7Z3D4 306 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 NRROSQ86YC3 692 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 RCOR2Q8IZ40 523 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 FSTL5Q8N475 847 aaPredicted RBP16.33■□□□□ 0.2
ATL3-202ENST00000535789 TFB1MQ8WVM0 346 aaKnown RBP16.33■□□□□ 0.2
ATL3-202ENST00000535789 AP2M1Q96CW1 435 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 RBM41Q96IZ5 413 aaKnown RBP16.33■□□□□ 0.2
ATL3-202ENST00000535789 FAM118BQ9BPY3 351 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 USP29Q9HBJ7 922 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 CYP4F12Q9HCS2 524 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 PACSIN2Q9UNF0 486 aaPredicted RBP16.33■□□□□ 0.2
ATL3-202ENST00000535789 CAPN6Q9Y6Q1 641 aa16.33■□□□□ 0.2
ATL3-202ENST00000535789 C1orf232A0A0U1RR37 186 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 A0A1W2PNU3 283 aaPredicted RBP16.32■□□□□ 0.2
ATL3-202ENST00000535789 CPED1A4D0V7 1026 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 GOLGA6CA6NDK9 693 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 GOLGA6BA6NDN3 693 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 URB1O60287 2271 aaKnown RBP16.32■□□□□ 0.2
ATL3-202ENST00000535789 NOBOXO60393 691 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 GOLGA6DP0CG33 693 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 BLKP51451 505 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 ELOCQ15369 112 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 NR0B2Q15466 257 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 SLC14A2Q15849 920 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 PCSK7Q16549 785 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 ODF2Q5BJF6 829 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 HENMT1Q5T8I9 393 aaKnown RBP16.32■□□□□ 0.2
ATL3-202ENST00000535789 ADAMTSL4Q6UY14 1074 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 KDELC2Q7Z4H8 507 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 ZNF567Q8N184 647 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 OXNAD1Q96HP4 312 aaPredicted RBP16.32■□□□□ 0.2
ATL3-202ENST00000535789 COX14Q96I36 57 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 RIOK2Q9BVS4 552 aaKnown RBP16.32■□□□□ 0.2
ATL3-202ENST00000535789 PHPT1Q9NRX4 125 aaPredicted RBP16.32■□□□□ 0.2
ATL3-202ENST00000535789 GOLGA6AQ9NYA3 693 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 UBP1Q9NZI7 540 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 DKK4Q9UBT3 224 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 CNOT6Q9ULM6 557 aaKnown RBP16.32■□□□□ 0.2
ATL3-202ENST00000535789 SUFUQ9UMX1 484 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 GUCA1BQ9UMX6 200 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 CLCA2Q9UQC9 943 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 SLC17A4Q9Y2C5 497 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 PLEKHM1Q9Y4G2 1056 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 SPO11Q9Y5K1 396 aa16.32■□□□□ 0.2
ATL3-202ENST00000535789 OAS3Q9Y6K5 1087 aaKnown RBP16.32■□□□□ 0.2
ATL3-202ENST00000535789 MACROD2A1Z1Q3 448 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 APOC4-APOC2K7ER74 178 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 AURKAO14965 403 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 DDX3YO15523 660 aaKnown RBP16.31■□□□□ 0.2
ATL3-202ENST00000535789 MT-CO3P00414 261 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 TNFP01375 233 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 APOC2P02655 101 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 CTSEP14091 401 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 JUPP14923 745 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 CA4P22748 312 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 NFKBIAP25963 317 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 PTPN7P35236 360 aa16.31■□□□□ 0.2
ATL3-202ENST00000535789 GPR1P46091 355 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms