RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 CHN2P52757 468 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 TAS2R40P59535 323 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 SEMA5AQ13591 1074 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 ACSS3Q9H6R3 686 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 ELOVL2Q9NXB9 296 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 COLEC10Q9Y6Z7 277 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 SSNA1O43805 119 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 UGT2B17O75795 530 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 OR4Q2P0C623 313 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 CCNYL2Q5T2Q4 361 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 OR14C36Q8NHC7 312 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 EQTNQ9NQ60 294 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 MBD2Q9UBB5 411 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 STX16-NPEPL1H3BU86 382 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 STX16O14662 325 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 PCCBP05166 539 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 FAM110CQ1W6H9 321 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 ATP13A5Q4VNC0 1218 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 FBXO42Q6P3S6 717 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 VGLL2Q8N8G2 317 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 LRRC10BA6NIK2 292 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 CDK14O94921 469 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 RASGRP1O95267 797 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 TNFRSF8P28908 595 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 GPD2P43304 727 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 PRELID2Q8N945 189 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 RCN3Q96D15 328 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 GOLGA2P5Q9HBQ8 144 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 DNAJC11Q9NVH1 559 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 TRPS1Q9UHF7 1281 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 EVLQ9UI08 416 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 AGLP35573 1532 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 PSMD11O00231 422 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 PRNPP04156 253 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 DBTP11182 482 aaKnown RBP18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 PTGES3Q15185 160 aaKnown RBP18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 PDK4Q16654 411 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 RNF43Q68DV7 783 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 TSHZ1Q6ZSZ6 1077 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 GALNT13Q8IUC8 556 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 C2orf73Q8N5S3 287 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 ZBTB2Q8N680 514 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 GPR20Q99678 358 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 CDH19Q9H159 772 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 COL5A2P05997 1499 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 ALAS2P22557 587 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 ZNF132P52740 706 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 PTCHD4Q6ZW05 846 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 CDH24Q86UP0 819 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 FEM1CQ96JP0 617 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 LHX5Q9H2C1 402 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 GPC6Q9Y625 555 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 TRBV23OR9-2A0A075B6M9 112 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 SMIM28A0A1B0GU29 152 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 PRMT5O14744 637 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 LYNP07948 512 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 SPAM1P38567 509 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 ERVK-21P61565 698 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 ATAD1Q8NBU5 361 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 KLRG1Q96E93 195 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 CAB39LQ9H9S4 337 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 ZNF304Q9HCX3 659 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 ZNF490Q9ULM2 529 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 RAI2Q9Y5P3 530 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 MST1RQ04912 1400 aa18.13■□□□□ 0.49
SFSWAP-203ENST00000535236 A0A1W2PQ67 120 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 KLRC4O43908 158 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 SERPINA6P08185 405 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 RBBP4Q09028 425 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 CERCAMQ5T4B2 595 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 RTL4Q6ZR62 310 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 JAZF1Q86VZ6 243 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 OR4K2Q8NGD2 314 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 MATN4O95460 622 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 CDH13P55290 713 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 ITGADQ13349 1161 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 FNBP1LQ5T0N5 605 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 POMZP3Q6PJE2 187 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 HSD17B14Q9BPX1 270 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 UBAP1Q9NZ09 502 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 RWDD3Q9Y3V2 267 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 SNX3O60493 162 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 STBD1O95210 358 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 TGFBR2P37173 567 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 AKIRIN2Q53H80 203 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 TTMPQ5BVD1 217 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 NAIF1Q69YI7 327 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 RHBDF2Q6PJF5 856 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 ANKS1BQ7Z6G8 1248 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 DHDDSQ86SQ9 333 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 NRSN1Q8IZ57 195 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 SFRP1Q8N474 314 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 TSPAN14Q8NG11 270 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 JOSD2Q8TAC2 188 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 SSR3Q9UNL2 185 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 ERVW-1Q9UQF0 538 aa18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 RIMS1Q86UR5 1692 aaKnown RBP18.12■□□□□ 0.49
SFSWAP-203ENST00000535236 DHRS12A0PJE2 317 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms