RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 DMXL1Q9Y485 3027 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 KIR2DS5A0A0G2JLQ3 304 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 A0A0G2JNG1 304 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 LRRD1A4D1F6 860 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 FAM149AA5PLN7 773 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 KIR2DS3K7RE56 304 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 TLX3O43711 291 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-217ENST00000534699 VEGFDO43915 354 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 LHCGRP22888 699 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 SPINT3P49223 89 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 PTSQ03393 145 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 ITKQ08881 620 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 MMRN1Q13201 1228 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 KIR2DS5Q14953 304 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 TEX44Q53QW1 395 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 ZNF542PQ5EBM4 170 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 PERM1Q5SV97 790 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 RAET1GQ6H3X3 334 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 CYB5D1Q6P9G0 228 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 GPR155Q7Z3F1 870 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 TRAM1L1Q8N609 369 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 PRR11Q96HE9 360 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-217ENST00000534699 BTBD6Q96KE9 485 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 PLEKHG4BQ96PX9 1271 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 TCEAL2Q9H3H9 227 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-217ENST00000534699 OR1A2Q9Y585 309 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 TMEM202A6NGA9 273 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 IPO7O95373 1038 aaKnown RBP10.34□□□□□ -0.75
CSDE1-217ENST00000534699 NDST3O95803 873 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 PRLP01236 227 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 KRT1P04264 644 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 HLA-DQB2P05538 268 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 MAGEA1P43355 309 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 TNNT3P45378 269 aaPredicted RBP10.34□□□□□ -0.75
CSDE1-217ENST00000534699 QPCTQ16769 361 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 HENMT1Q5T8I9 393 aaKnown RBP10.34□□□□□ -0.75
CSDE1-217ENST00000534699 LRRC66Q68CR7 880 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 WASH2PQ6VEQ5 465 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 TMC3Q7Z5M5 1100 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 SPRED1Q7Z699 444 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 FAM46DQ8NEK8 389 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 ZDHHC1Q8WTX9 485 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 KCNE4Q8WWG9 221 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 NSMCE3Q96MG7 304 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 TRIB3Q96RU7 358 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 ZPBPQ9BS86 351 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 FAM83DQ9H4H8 585 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 CYP4F12Q9HCS2 524 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 WASH6PQ9NQA3 447 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 PDP2Q9P2J9 529 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 PNMA8BQ9ULN7 279 aaPredicted RBP10.34□□□□□ -0.75
CSDE1-217ENST00000534699 PCDHGA3Q9Y5H0 932 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 ZNF106Q9H2Y7 1883 aaKnown RBP10.34□□□□□ -0.75
CSDE1-217ENST00000534699 ZFC3H1O60293 1989 aaKnown RBP10.34□□□□□ -0.75
CSDE1-217ENST00000534699 FAM170AA1A519 330 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 ERVH48-1M5A8F1 160 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 FGF1P05230 155 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 CD48P09326 243 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 CTNNA2P26232 953 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 MPP3Q13368 585 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 PYCR3Q53H96 274 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 TFDP3Q5H9I0 405 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 LRRC73Q5JTD7 316 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 GALNT13Q8IUC8 556 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 PDCD6IPQ8WUM4 868 aaKnown RBP10.34□□□□□ -0.75
CSDE1-217ENST00000534699 TFB1MQ8WVM0 346 aaKnown RBP10.34□□□□□ -0.75
CSDE1-217ENST00000534699 RAPGEF5Q92565 580 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 PDXPQ96GD0 296 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 TEKT5Q96M29 485 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 FCRL5Q96RD9 977 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 FAM117AQ9C073 453 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 CARS2Q9HA77 564 aaKnown RBP10.34□□□□□ -0.75
CSDE1-217ENST00000534699 GLOD4Q9HC38 313 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 SARS2Q9NP81 518 aaKnown RBP10.34□□□□□ -0.75
CSDE1-217ENST00000534699 SEPT10Q9P0V9 454 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 TAAR2Q9P1P5 351 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 GULP1Q9UBP9 304 aa10.34□□□□□ -0.75
CSDE1-217ENST00000534699 PLD2O14939 933 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 ZRANB2O95218 330 aaKnown RBP eCLIP10.33□□□□□ -0.76
CSDE1-217ENST00000534699 CPNE6O95741 557 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 MMP2P08253 660 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 CDKN2BP42772 138 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 DSC2Q02487 901 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 NIPAL4Q0D2K0 466 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 C1orf61Q13536 156 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 ZNF569Q5MCW4 686 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 Q6ZVL8 140 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 LYSMD3Q7Z3D4 306 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 RFX6Q8HWS3 928 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 CCNYQ8ND76 341 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 OR4D9Q8NGE8 314 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 HAUS1Q96CS2 278 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 TEFMQ96QE5 360 aaKnown RBP10.33□□□□□ -0.76
CSDE1-217ENST00000534699 TIMM29Q9BSF4 260 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 IMPACTQ9P2X3 320 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 CCDC66A2RUB6 948 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 RHPN2P1A8MT19 583 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 B4E171 279 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 TOX3O15405 576 aaPredicted RBP10.33□□□□□ -0.76
CSDE1-217ENST00000534699 CAPN5O15484 640 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms