RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PTPN3P26045 913 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 OR1D5P58170 312 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 KIAA1024LP59773 190 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 IFI35P80217 286 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-215ENST00000533946 CTBSQ01459 385 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 CFHR1Q03591 330 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 CCDC173Q0VFZ6 552 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 ILKQ13418 452 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 RTP5Q14D33 572 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 TCEAL1Q15170 157 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 C3orf38Q5JPI3 329 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 NKAIN2Q5VXU1 208 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 ALS2CLQ60I27 953 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 RAET1GQ6H3X3 334 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 FOXR1Q6PIV2 292 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 SLC30A9Q6PML9 568 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 ZNF574Q6ZN55 896 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-215ENST00000533946 TAF8Q7Z7C8 310 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 ZC3H18Q86VM9 953 aaKnown RBP9.6□□□□□ -0.87
SSBP3-215ENST00000533946 GPR26Q8NDV2 337 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 PMEPA1Q969W9 287 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 CCDC97Q96F63 343 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-215ENST00000533946 OXNAD1Q96HP4 312 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-215ENST00000533946 WDR26Q9H7D7 661 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 PCDH9Q9HC56 1237 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 BPIFA1Q9NP55 256 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 ASCL3Q9NQ33 180 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 DONSONQ9NYP3 566 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 DKK4Q9UBT3 224 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 PACSIN2Q9UNF0 486 aaPredicted RBP9.6□□□□□ -0.87
SSBP3-215ENST00000533946 DGKBQ9Y6T7 804 aa9.6□□□□□ -0.87
SSBP3-215ENST00000533946 GCN1Q92616 2671 aaKnown RBP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 hCG_1818297A0A087WSY0 165 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 TCRBV7S2A1N4TA0A589 114 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 CFAP69A5D8W1 941 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 CAPN8A6NHC0 703 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 CACNB4O00305 520 aaPredicted RBP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 NTN3O00634 580 aaPredicted RBP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 TPP1O14773 563 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 APOL1O14791 398 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 PPM1DO15297 605 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 SPOPO43791 374 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 PMPCBO75439 489 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 ECEL1O95672 775 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 PRB1P04280 392 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 ALPPL2P10696 532 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 MYCLP1P12525 358 aaPredicted RBP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 FECHP22830 423 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 MPSTP25325 297 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 HSPA9P38646 679 aaKnown RBP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 ADCY8P40145 1251 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 ETV5P41161 510 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 ARHGAP25P42331 645 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 POLR2LP62875 67 aaKnown RBP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 GABREP78334 506 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 HLTFQ14527 1009 aaKnown RBP eCLIP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 PRKD1Q15139 912 aaPredicted RBP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 SOWAHCQ53LP3 525 aaPredicted RBP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 OGFOD3Q6PK18 319 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 KDELC1Q6UW63 502 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 PDZD3Q86UT5 571 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 CNGA4Q8IV77 575 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 RHOT1Q8IXI2 618 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 NAGSQ8N159 534 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 SPC24Q8NBT2 197 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 FAM174AQ8TBP5 190 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 GPBAR1Q8TDU6 330 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 BTN2A2Q8WVV5 523 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 ALG3Q92685 438 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 AP2M1Q96CW1 435 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 IMP4Q96G21 291 aaKnown RBP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 COX14Q96I36 57 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 DUSP23Q9BVJ7 150 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 C1QTNF7Q9BXJ2 289 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 SEMA6CQ9H3T2 930 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 RDH14Q9HBH5 336 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 GLOD4Q9HC38 313 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 TMEM9Q9P0T7 183 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 TAAR2Q9P1P5 351 aa9.59□□□□□ -0.87
SSBP3-215ENST00000533946 EPN1Q9Y6I3 576 aaPredicted RBP9.59□□□□□ -0.87
SSBP3-215ENST00000533946 BSNQ9UPA5 3926 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 C1orf232A0A0U1RR37 186 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 GRID2IPA4D2P6 1211 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 ANKRD66B4E2M5 251 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 MTX2O75431 263 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 NDUFA10O95299 355 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 RPLP0P05388 317 aaKnown RBP9.58□□□□□ -0.88
SSBP3-215ENST00000533946 HOXC4P09017 264 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-215ENST00000533946 CYP2A6P11509 494 aaPredicted RBP9.58□□□□□ -0.88
SSBP3-215ENST00000533946 ITIH1P19827 911 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 NFKB1P19838 968 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 GPR1P46091 355 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 SPINT3P49223 89 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 B4GALNT1Q00973 533 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 E2F1Q01094 437 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 ELOCQ15369 112 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 TGIF1Q15583 401 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 TSR1Q2NL82 804 aaKnown RBP9.58□□□□□ -0.88
SSBP3-215ENST00000533946 LRRC38Q5VT99 294 aa9.58□□□□□ -0.88
SSBP3-215ENST00000533946 PCSK4Q6UW60 755 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms