RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 POM121BA6NF01 834 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 K7ESM1 405 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 INPP4BO15327 924 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 CD38P28907 300 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 CSNK1EP49674 416 aaKnown RBP17.39■□□□□ 0.37
NXF1-216ENST00000533499 ZNF140P52738 457 aaPredicted RBP17.39■□□□□ 0.37
NXF1-216ENST00000533499 C21orf59P57076 290 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 RACK1P63244 317 aaKnown RBP17.39■□□□□ 0.37
NXF1-216ENST00000533499 CAV1Q03135 178 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 DHX9Q08211 1270 aaKnown RBP17.39■□□□□ 0.37
NXF1-216ENST00000533499 INPP5AQ14642 412 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 TEAD4Q15561 434 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 SKIDA1Q1XH10 827 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 TSTD2Q5T7W7 516 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 CBARPQ8N350 705 aaPredicted RBP17.39■□□□□ 0.37
NXF1-216ENST00000533499 DENND6BQ8NEG7 585 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 CENPTQ96BT3 561 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 KLHDC7BQ96G42 594 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 RANBP9Q96S59 729 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 AGAP2Q99490 1192 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 ORAI3Q9BRQ5 295 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 FRMD8Q9BZ67 464 aaPredicted RBP17.39■□□□□ 0.37
NXF1-216ENST00000533499 SMOC1Q9H4F8 434 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 SLC2A6Q9UGQ3 507 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.39■□□□□ 0.37
NXF1-216ENST00000533499 PILRBQ9UKJ0 227 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 OR1A2Q9Y585 309 aa17.39■□□□□ 0.37
NXF1-216ENST00000533499 V9GYY5 206 aaPredicted RBP17.39■□□□□ 0.37
NXF1-216ENST00000533499 A0A1B0GTW7 788 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 A6NNZ2 444 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 EPN2O95208 641 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 LMNAP02545 664 aaKnown RBP17.38■□□□□ 0.37
NXF1-216ENST00000533499 THEGLP0DJG4 465 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 MPLP40238 635 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 NBL1P41271 181 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 AFF3P51826 1226 aaKnown RBP17.38■□□□□ 0.37
NXF1-216ENST00000533499 THOP1P52888 689 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 PDIA2Q13087 525 aaKnown RBP17.38■□□□□ 0.37
NXF1-216ENST00000533499 CHRNA6Q15825 494 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 PNCKQ6P2M8 343 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 GCNT7Q6ZNI0 430 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 Q6ZSR6 202 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 NLRP9Q7RTR0 991 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 ANKMY2Q8IV38 441 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 IFT20Q8IY31 132 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 PELI3Q8N2H9 469 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 OTUD6BQ8N6M0 293 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 OR6P1Q8NGX9 317 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 GDAP1Q8TB36 358 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 FBXO25Q8TCJ0 367 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 STYXQ8WUJ0 223 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 SKA1Q96BD8 255 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 ZNF669Q96BR6 464 aaPredicted RBP17.38■□□□□ 0.37
NXF1-216ENST00000533499 STAMBPL1Q96FJ0 436 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 CFAP36Q96G28 342 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 LOXL4Q96JB6 756 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 LENG8Q96PV6 779 aaPredicted RBP17.38■□□□□ 0.37
NXF1-216ENST00000533499 FAM96AQ9H5X1 160 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 SUDS3Q9H7L9 328 aaPredicted RBP17.38■□□□□ 0.37
NXF1-216ENST00000533499 NLE1Q9NVX2 485 aaPredicted RBP17.38■□□□□ 0.37
NXF1-216ENST00000533499 CHMP2BQ9UQN3 213 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 HS3ST3A1Q9Y663 406 aa17.38■□□□□ 0.37
NXF1-216ENST00000533499 TNRC6BQ9UPQ9 1833 aaKnown RBP17.37■□□□□ 0.37
NXF1-216ENST00000533499 RALGAPA1Q6GYQ0 2036 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 A0A1B0GVT2 93 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 PRR5-ARHGAP8B1AHC4 643 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 PATE3B3GLJ2 98 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 PPFIA2O75334 1257 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 TSHRP16473 764 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 NMBRP28336 390 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 MC4RP32245 332 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 HADHAP40939 763 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 DPP6P42658 865 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 PRAMEP78395 509 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 MSS51Q4VC12 460 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 ZRANB3Q5FWF4 1079 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 ZDHHC20Q5W0Z9 365 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 ESRP1Q6NXG1 681 aaKnown RBP17.37■□□□□ 0.37
NXF1-216ENST00000533499 DOK6Q6PKX4 331 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 MICALCLQ6ZW33 695 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 CENPUQ71F23 418 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 ZNF765Q7L2R6 523 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 TAS2R42Q7RTR8 314 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 TRIM74Q86UV6 250 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 SUMF1Q8NBK3 374 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 TMEM145Q8NBT3 493 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 OR13H1Q8NG92 308 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 ART4Q93070 314 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 BMFQ96LC9 184 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 TBATAQ96M53 351 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 ZNF778Q96MU6 729 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 TRIM56Q9BRZ2 755 aaKnown RBP17.37■□□□□ 0.37
NXF1-216ENST00000533499 WDR26Q9H7D7 661 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 ARFGAP3Q9NP61 516 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 SAYSD1Q9NPB0 183 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 IL26Q9NPH9 171 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 RRAGDQ9NQL2 400 aaPredicted RBP17.37■□□□□ 0.37
NXF1-216ENST00000533499 FSCN3Q9NQT6 498 aa17.37■□□□□ 0.37
NXF1-216ENST00000533499 PHPT1Q9NRX4 125 aaPredicted RBP17.37■□□□□ 0.37
NXF1-216ENST00000533499 MTRF1LQ9UGC7 380 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms