RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 RTP4Q96DX8 246 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 FRMD8Q9BZ67 464 aaPredicted RBP20.38■□□□□ 0.85
CCS-208ENST00000533244 SLC13A1Q9BZW2 595 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 CLPBQ9H078 707 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 PKD2L2Q9NZM6 624 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 SPO11Q9Y5K1 396 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 SCN8AQ9UQD0 1980 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 TPP1O14773 563 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 FFAR2O15552 330 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 LIASO43766 372 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 GCATO75600 419 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 PYGLP06737 847 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 ALPPL2P10696 532 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 HLA-DPA1P20036 260 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 ADRA1AP35348 466 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 CHRNA4P43681 627 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 GPR1P46091 355 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 GDF10P55107 478 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 SIX1Q15475 284 aaPredicted RBP20.37■□□□□ 0.85
CCS-208ENST00000533244 SLC1A5Q15758 541 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 PRRT3Q5FWE3 981 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 HID1Q8IV36 788 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 FAM181AQ8N9Y4 354 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 LMX1AQ8TE12 382 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 ATG4AQ8WYN0 398 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 AGAP2Q99490 1192 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 DUSP23Q9BVJ7 150 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 RIOK2Q9BVS4 552 aaKnown RBP20.37■□□□□ 0.85
CCS-208ENST00000533244 SHOC2Q9UQ13 582 aa20.37■□□□□ 0.85
CCS-208ENST00000533244 AAR2Q9Y312 384 aaKnown RBP20.37■□□□□ 0.85
CCS-208ENST00000533244 CEP295Q9C0D2 2601 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 LMO7DNF2Z398 122 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 ACADVLP49748 655 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 DCDC1P59894 354 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 FOXC1Q12948 553 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 RANBP10Q6VN20 620 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 FSTL5Q8N475 847 aaPredicted RBP20.36■□□□□ 0.85
CCS-208ENST00000533244 FAM71DQ8N9W8 422 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 COX14Q96I36 57 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 PPP1R2P1Q96PQ5 205 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 TMEM121Q9BTD3 319 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 TRABDQ9H4I3 376 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 PCDHGA1Q9Y5H4 931 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 LY6G6EA0A0G2JKS1 128 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 AURKAO14965 403 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 ZSCAN12O43309 604 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 FGF1P05230 155 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 CEACAM5P06731 702 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 CKMT2P17540 419 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 DNAJC3Q13217 504 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 C1orf61Q13536 156 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 SDR16C5Q8N3Y7 309 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 TTC30BQ8N4P2 665 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 PNPLA1Q8N8W4 532 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 FSD1LQ9BXM9 530 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 CDH19Q9H159 772 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 FAM83DQ9H4H8 585 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 MRPL40Q9NQ50 206 aaKnown RBP20.36■□□□□ 0.85
CCS-208ENST00000533244 SLC17A4Q9Y2C5 497 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 U3KQA8 63 aa20.36■□□□□ 0.85
CCS-208ENST00000533244 PRSS38A1L453 326 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 GOLGA6CA6NDK9 693 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 GOLGA6BA6NDN3 693 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 TOP3BO95985 862 aaKnown RBP20.35■□□□□ 0.85
CCS-208ENST00000533244 TNFP01375 233 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 CELA2BP08218 269 aaPredicted RBP20.35■□□□□ 0.85
CCS-208ENST00000533244 GOLGA6DP0CG33 693 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 ACP1P24666 158 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 HMGCLP35914 325 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 TNNT3P45378 269 aaPredicted RBP20.35■□□□□ 0.85
CCS-208ENST00000533244 PRPSAP1Q14558 356 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 ELOCQ15369 112 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 PARP6Q2NL67 630 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 HS1BP3Q53T59 392 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 ZCCHC8Q6NZY4 707 aaKnown RBP20.35■□□□□ 0.85
CCS-208ENST00000533244 SLC25A41Q8N5S1 370 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 SCARF2Q96GP6 870 aaPredicted RBP20.35■□□□□ 0.85
CCS-208ENST00000533244 FICDQ9BVA6 458 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 GPR63Q9BZJ6 419 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 GOLGA6AQ9NYA3 693 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 HACD3Q9P035 362 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 CNOT6Q9ULM6 557 aaKnown RBP20.35■□□□□ 0.85
CCS-208ENST00000533244 JRKLQ9Y4A0 524 aa20.35■□□□□ 0.85
CCS-208ENST00000533244 GOLGA4Q13439 2230 aaKnown RBP20.34■□□□□ 0.85
CCS-208ENST00000533244 FADS2P1A8MWK0 482 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 METTL18O95568 372 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 AGTP01019 485 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 FUCA1P04066 466 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 CKMT1AP12532 417 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 STIP1P31948 543 aaKnown RBP20.34■□□□□ 0.85
CCS-208ENST00000533244 DEFB133Q30KQ1 61 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 KCTD11Q693B1 232 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 ARHGEF18Q6ZSZ5 1173 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 RD3Q7Z3Z2 195 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 GPR26Q8NDV2 337 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 C1orf54Q8WWF1 131 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 HIC2Q96JB3 615 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 APOLD1Q96LR9 279 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 BOCQ9BWV1 1114 aa20.34■□□□□ 0.85
CCS-208ENST00000533244 RAD18Q9NS91 495 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms