RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 NFKBIL1Q9UBC1 381 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-214ENST00000533209 KLF15Q9UIH9 416 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 PCDHGB2Q9Y5G2 931 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 SPTBN4Q9H254 2564 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 CABIN1Q9Y6J0 2220 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 GOLGA6L10A0A0M3HER8 536 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 YKT6O15498 198 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 SUN1O94901 812 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 BPIP17213 487 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 SDHBP21912 280 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 EPHA8P29322 1005 aaPredicted RBP11.94□□□□□ -0.5
SSBP3-214ENST00000533209 CASQ1P31415 396 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 KIAA1024LP59773 190 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 DCDC1P59894 354 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 BNIP3Q12983 259 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 TRIP13Q15645 432 aaPredicted RBP11.94□□□□□ -0.5
SSBP3-214ENST00000533209 HENMT1Q5T8I9 393 aaKnown RBP11.94□□□□□ -0.5
SSBP3-214ENST00000533209 RAET1GQ6H3X3 334 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 ADAMTSL4Q6UY14 1074 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 KANSL1Q7Z3B3 1105 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 GLT6D1Q7Z4J2 308 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 HEATR4Q86WZ0 1026 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 SAP25Q8TEE9 199 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 LRRC45Q96CN5 670 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 RTKNQ9BST9 563 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 FAM83DQ9H4H8 585 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 BPIFA1Q9NP55 256 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 RAD18Q9NS91 495 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 DNAJC28Q9NX36 388 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 IL17CQ9P0M4 197 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 FEZ2Q9UHY8 353 aaPredicted RBP11.94□□□□□ -0.5
SSBP3-214ENST00000533209 NEU2Q9Y3R4 380 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 ARL5AQ9Y689 179 aa11.94□□□□□ -0.5
SSBP3-214ENST00000533209 ASCC3Q8N3C0 2202 aaKnown RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 TMEM202A6NGA9 273 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 FADS2P1A8MWK0 482 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 E7EVH7 732 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 CACNB4O00305 520 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 BUD23O43709 281 aaKnown RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 KRT14P02533 472 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 CSF2P04141 144 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 MYCLP1P12525 358 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 NME1P15531 152 aaKnown RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 TPH1P17752 444 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 GRIA1P42261 906 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 GPR1P46091 355 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 CDK3Q00526 305 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 TAF1AQ15573 450 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 ALG11Q2TAA5 492 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 ALS2CLQ60I27 953 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 KCTD16Q68DU8 428 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 PIP4P1Q86T03 277 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 LINC00523Q86TU6 105 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 GATAD2AQ86YP4 633 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 OR52K1Q8NGK4 314 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 BRSK1Q8TDC3 778 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 TRIM44Q96DX7 344 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 C16orf45Q96MC5 204 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 WDR92Q96MX6 357 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 DDX47Q9H0S4 455 aaKnown RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 CDH19Q9H159 772 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 TCEAL2Q9H3H9 227 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 FGF22Q9HCT0 170 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 PHPT1Q9NRX4 125 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 PIH1D1Q9NWS0 290 aaKnown RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 UCKL1Q9NWZ5 548 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 RNF14Q9UBS8 474 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 CNOT6Q9ULM6 557 aaKnown RBP11.93□□□□□ -0.5
SSBP3-214ENST00000533209 KCTD3Q9Y597 815 aa11.93□□□□□ -0.5
SSBP3-214ENST00000533209 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-214ENST00000533209 TNFRSF10CO14798 259 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 SH3BP5O60239 455 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 SDC3O75056 442 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 PIAS2O75928 621 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 PYGLP06737 847 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 APRTP07741 180 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 JUNDP17535 347 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 DGKAP23743 735 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 HTR1BP28222 390 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 PAFAH1B1P43034 410 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 LMAN1P49257 510 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 VPS41P49754 854 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 SRP54P61011 504 aaKnown RBP11.92□□□□□ -0.5
SSBP3-214ENST00000533209 HNRNPKP61978 463 aaKnown RBP eCLIP11.92□□□□□ -0.5
SSBP3-214ENST00000533209 BASP1P80723 227 aaKnown RBP11.92□□□□□ -0.5
SSBP3-214ENST00000533209 PTPRCAPQ14761 206 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 SUZ12Q15022 739 aaKnown RBP11.92□□□□□ -0.5
SSBP3-214ENST00000533209 ENPP7Q6UWV6 458 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 TRIM74Q86UV6 250 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 NAXDQ8IW45 347 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 PHACTR4Q8IZ21 702 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 RBFAQ8N0V3 343 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 SLC25A45Q8N413 288 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 OR56A4Q8NGH8 313 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 GRK7Q8WTQ7 553 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 OR1E3Q8WZA6 343 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 TSACCQ96A04 125 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-214ENST00000533209 COX14Q96I36 57 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 HIC2Q96JB3 615 aa11.92□□□□□ -0.5
SSBP3-214ENST00000533209 PLEKHG4BQ96PX9 1271 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms