RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 RAB6CQ9H0N0 254 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 LRRC19Q9H756 370 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 RPS6KL1Q9Y6S9 549 aa12.39□□□□□ -0.43
CAPN1-223ENST00000533079 ESPNB1AK53 854 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 TRAFD1O14545 582 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-223ENST00000533079 INPP4BO15327 924 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 SOCS5O75159 536 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 PALMO75781 387 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 PTMAP06454 111 aaKnown RBP12.38□□□□□ -0.43
CAPN1-223ENST00000533079 MMEP08473 750 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 ANKRD34CP0C6C1 535 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 NR1D1P20393 614 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 GNLYP22749 145 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 MAN2A1Q16706 1144 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-223ENST00000533079 CDKAL1Q5VV42 579 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 NOP9Q86U38 636 aaKnown RBP12.38□□□□□ -0.43
CAPN1-223ENST00000533079 TICAM1Q8IUC6 712 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 APLFQ8IW19 511 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-223ENST00000533079 PELI3Q8N2H9 469 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 SFRP1Q8N474 314 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 CPT1CQ8TCG5 803 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 SLC37A2Q8TED4 501 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 SEC14L1Q92503 715 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 SH3KBP1Q96B97 665 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 DTD2Q96FN9 168 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 CTRCQ99895 268 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
CAPN1-223ENST00000533079 SARS2Q9NP81 518 aaKnown RBP12.38□□□□□ -0.43
CAPN1-223ENST00000533079 B4GALT6Q9UBX8 382 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 KCND3Q9UK17 655 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 ST14Q9Y5Y6 855 aa12.38□□□□□ -0.43
CAPN1-223ENST00000533079 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-223ENST00000533079 ARHGAP42A6NI28 874 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 TTLL8A6PVC2 850 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 F8VZ95 297 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 J3KR12 359 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 CREB3O43889 395 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 FUCA1P04066 466 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 PYGLP06737 847 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 KRT3P12035 628 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 GPD1P21695 349 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 VIPR1P32241 457 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 MTIF2P46199 727 aaKnown RBP12.37□□□□□ -0.43
CAPN1-223ENST00000533079 RGRP47804 291 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 PPM1FP49593 454 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-223ENST00000533079 RENBPP51606 427 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 HHEXQ03014 270 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 DPTQ07507 201 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 CNGA3Q16281 694 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 ATP1A1-AS1Q5TC04 95 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 RAET1GQ6H3X3 334 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 TRIM72Q6ZMU5 477 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 CREBRFQ8IUR6 639 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 PYROXD2Q8N2H3 581 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 AVL9Q8NBF6 648 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 TSEN2Q8NCE0 465 aaKnown RBP12.37□□□□□ -0.43
CAPN1-223ENST00000533079 JOSD2Q8TAC2 188 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 MAGEB5Q9BZ81 275 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 ULBP3Q9BZM4 244 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 APMAPQ9HDC9 416 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 SIDT1Q9NXL6 827 aaKnown RBP12.37□□□□□ -0.43
CAPN1-223ENST00000533079 ZKSCAN5Q9Y2L8 839 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 PCDHGA6Q9Y5G7 932 aa12.37□□□□□ -0.43
CAPN1-223ENST00000533079 MN1Q10571 1320 aaPredicted RBP12.37□□□□□ -0.43
CAPN1-223ENST00000533079 EIF3CLB5ME19 914 aaKnown RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 K7EM74 188 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 HEXIM1O94992 359 aaKnown RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 CYP1A1P04798 512 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 CYP2A6P11509 494 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 SLC2A4P14672 509 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 DESP17661 470 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 CDK11BP21127 795 aaKnown RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 VARSP26640 1264 aaKnown RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 RFC1P35251 1148 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 DLSTP36957 453 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 UBASH3AP57075 661 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 GSDMDP57764 484 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 TPI1P60174 286 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 NR1I3Q14994 352 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 CYB5D1Q6P9G0 228 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 C6orf15Q6UXA7 325 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 MAMDC2Q7Z304 686 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 LYSMD3Q7Z3D4 306 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 FAM114A1Q8IWE2 563 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 LZTR1Q8N653 840 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 PSKH2Q96QS6 385 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 EIF3CQ99613 913 aaKnown RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 SELENOOQ9BVL4 669 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 NAA15Q9BXJ9 866 aaKnown RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 XPO4Q9C0E2 1151 aaKnown RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 NDST4Q9H3R1 872 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 IFNKQ9P0W0 207 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 NOCTQ9UK39 431 aaKnown RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 CROTQ9UKG9 612 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 FZD10Q9ULW2 581 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 FHOD1Q9Y613 1164 aa12.36□□□□□ -0.43
CAPN1-223ENST00000533079 MRPS18BQ9Y676 258 aaKnown RBP12.36□□□□□ -0.43
CAPN1-223ENST00000533079 OAS3Q9Y6K5 1087 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms