RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 KCTD3Q9Y597 815 aa11.52□□□□□ -0.57
CMTM1-216ENST00000533078 USP9YO00507 2555 aaPredicted RBP11.51□□□□□ -0.57
CMTM1-216ENST00000533078 PRR19A6NJB7 356 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 A8MU76 341 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 TRAFD1O14545 582 aaPredicted RBP11.51□□□□□ -0.57
CMTM1-216ENST00000533078 POLR1CO15160 346 aaPredicted RBP11.51□□□□□ -0.57
CMTM1-216ENST00000533078 NKX2-8O15522 239 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 RNF8O76064 485 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 SLC2A4P14672 509 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 PSMA2P25787 234 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 CSF2RBP32927 897 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 ETV3P41162 512 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 FASLGP48023 281 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 ARSDP51689 593 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 MC2RQ01718 297 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 PTP4A2Q12974 167 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 CT47A1Q5JQC4 288 aaPredicted RBP11.51□□□□□ -0.57
CMTM1-216ENST00000533078 ERMARDQ5T6L9 678 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 WDR74Q6RFH5 385 aaPredicted RBP11.51□□□□□ -0.57
CMTM1-216ENST00000533078 RFX8Q6ZV50 586 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 MON1BQ7L1V2 547 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 ESX1Q8N693 406 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 AVL9Q8NBF6 648 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 ANKRD20A12PQ8NF67 263 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 NEK11Q8NG66 645 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 RTP4Q96DX8 246 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 GANQ9H2C0 597 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
CMTM1-216ENST00000533078 SPTBN1Q01082 2364 aaKnown RBP11.51□□□□□ -0.57
CMTM1-216ENST00000533078 RP1L1Q8IWN7 2480 aaPredicted RBP11.5□□□□□ -0.57
CMTM1-216ENST00000533078 INPP4BO15327 924 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 PRPSAP2O60256 369 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 STK17BO94768 372 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 ASMTLO95671 621 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 GM2AP17900 193 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 ERCC2P18074 760 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 POLD2P49005 469 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 JAM2P57087 298 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 RPL7AP62424 266 aaKnown RBP11.5□□□□□ -0.57
CMTM1-216ENST00000533078 HHEXQ03014 270 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 DPCR1Q3MIW9 517 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 CRTC2Q53ET0 693 aaPredicted RBP11.5□□□□□ -0.57
CMTM1-216ENST00000533078 PPP6R3Q5H9R7 873 aaPredicted RBP11.5□□□□□ -0.57
CMTM1-216ENST00000533078 RALGPS1Q5JS13 557 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 PPP1R15BQ5SWA1 713 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 ARMC12Q5T9G4 340 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 ADAMTSL4Q6UY14 1074 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 MARK2Q7KZI7 788 aaKnown RBP11.5□□□□□ -0.57
CMTM1-216ENST00000533078 PELI3Q8N2H9 469 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 EFCAB3Q8N7B9 438 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 SLC37A2Q8TED4 501 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 NCSTNQ92542 709 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 AP2M1Q96CW1 435 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 NUDCD1Q96RS6 583 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 CTRCQ99895 268 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.5□□□□□ -0.57
CMTM1-216ENST00000533078 EPB41L1Q9H4G0 881 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 ZWILCHQ9H900 591 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 FBXO8Q9NRD0 319 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 SAMSN1Q9NSI8 373 aaKnown RBP11.5□□□□□ -0.57
CMTM1-216ENST00000533078 HAUS2Q9NVX0 235 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 GPATCH2LQ9NWQ4 482 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 TMEM9Q9P0T7 183 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 DNPEPQ9ULA0 475 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 PLAAQ9Y263 795 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 PCDHGC4Q9Y5F7 938 aa11.5□□□□□ -0.57
CMTM1-216ENST00000533078 NOTCH2Q04721 2471 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 LOC101059948A0A1B0GTJ6 334 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 BLACEA4D250 179 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 HTRA2O43464 458 aaPredicted RBP11.49□□□□□ -0.57
CMTM1-216ENST00000533078 VPS4BO75351 444 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 MAP3K6O95382 1288 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 MAPK9P45984 424 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 DPTQ07507 201 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 NFATC2Q13469 925 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 Q6ZVL8 140 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 SLC9B2Q86UD5 537 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 ZNF761Q86XN6 746 aaPredicted RBP11.49□□□□□ -0.57
CMTM1-216ENST00000533078 PLXDC1Q8IUK5 500 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 PSTKQ8IV42 348 aaKnown RBP11.49□□□□□ -0.57
CMTM1-216ENST00000533078 UNC5BQ8IZJ1 945 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 SCRN2Q96FV2 425 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 PCDHB18PQ96TA0 734 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 AGPAT1Q99943 283 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 PARVAQ9NVD7 372 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 PDP2Q9P2J9 529 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 CNOT8Q9UFF9 292 aaKnown RBP11.49□□□□□ -0.57
CMTM1-216ENST00000533078 PCSK1NQ9UHG2 260 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 ZNHIT2Q9UHR6 403 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 VPS4AQ9UN37 437 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 TMEM184BQ9Y519 407 aaPredicted RBP11.49□□□□□ -0.57
CMTM1-216ENST00000533078 RPS6KL1Q9Y6S9 549 aa11.49□□□□□ -0.57
CMTM1-216ENST00000533078 UTP20O75691 2785 aaKnown RBP11.48□□□□□ -0.57
CMTM1-216ENST00000533078 TRBV23OR9-2A0A075B6M9 112 aa11.48□□□□□ -0.57
CMTM1-216ENST00000533078 CLEC18AA5D8T8 446 aa11.48□□□□□ -0.57
CMTM1-216ENST00000533078 H3BRJ5 948 aa11.48□□□□□ -0.57
CMTM1-216ENST00000533078 AGFG2O95081 481 aa11.48□□□□□ -0.57
CMTM1-216ENST00000533078 FUCA1P04066 466 aa11.48□□□□□ -0.57
CMTM1-216ENST00000533078 ZNF30P17039 623 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms