RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SCAMP4Q969E2 229 aa15.33■□□□□ 0.04
CPSF1-210ENST00000532935 AP2M1Q96CW1 435 aa15.33■□□□□ 0.04
CPSF1-210ENST00000532935 HES6Q96HZ4 224 aa15.33■□□□□ 0.04
CPSF1-210ENST00000532935 C10orf88Q9H8K7 445 aa15.33■□□□□ 0.04
CPSF1-210ENST00000532935 USP29Q9HBJ7 922 aa15.33■□□□□ 0.04
CPSF1-210ENST00000532935 MRPL40Q9NQ50 206 aaKnown RBP15.33■□□□□ 0.04
CPSF1-210ENST00000532935 EVA1BQ9NVM1 165 aa15.33■□□□□ 0.04
CPSF1-210ENST00000532935 UBP1Q9NZI7 540 aa15.33■□□□□ 0.04
CPSF1-210ENST00000532935 U3KQA8 63 aa15.33■□□□□ 0.04
CPSF1-210ENST00000532935 USP24Q9UPU5 2620 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 BPTFQ12830 3046 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 C1QTNF9BB2RNN3 333 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 KRT86O43790 486 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 NDST3O95803 873 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 SOD1P00441 154 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 C1QTNF9P0C862 333 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 DUSP3P51452 185 aaPredicted RBP15.32■□□□□ 0.04
CPSF1-210ENST00000532935 EIF3EP60228 445 aaKnown RBP15.32■□□□□ 0.04
CPSF1-210ENST00000532935 C6orf132Q5T0Z8 1188 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 KDELC1Q6UW63 502 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 PID1Q7Z2X4 250 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 LYSMD3Q7Z3D4 306 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 NLRP8Q86W28 1048 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 TMPRSS12Q86WS5 348 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 MARCH9Q86YJ5 346 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 CDKL3Q8IVW4 592 aaPredicted RBP15.32■□□□□ 0.04
CPSF1-210ENST00000532935 LRRC8AQ8IWT6 810 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 SDR16C5Q8N3Y7 309 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 CCHCR1Q8TD31 782 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 TRIM44Q96DX7 344 aaPredicted RBP15.32■□□□□ 0.04
CPSF1-210ENST00000532935 FCRL5Q96RD9 977 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 BOCQ9BWV1 1114 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 CYP4F12Q9HCS2 524 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 NCKIPSDQ9NZQ3 722 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 FAM153AQ9UHL3 310 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 TRHDEQ9UKU6 1024 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 GUCA1BQ9UMX6 200 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 DOLKQ9UPQ8 538 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 DMXL2Q8TDJ6 3036 aa15.32■□□□□ 0.04
CPSF1-210ENST00000532935 PRSS38A1L453 326 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 FAM149AA5PLN7 773 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 F5H423 210 aaPredicted RBP15.31■□□□□ 0.04
CPSF1-210ENST00000532935 PTMAP06454 111 aaKnown RBP15.31■□□□□ 0.04
CPSF1-210ENST00000532935 CEACAM5P06731 702 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 PYGLP06737 847 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 PIRTP0C851 137 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 RBP3P10745 1247 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 SPINT3P49223 89 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 WNT3AP56704 352 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 CLDN6P56747 220 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 E2F1Q01094 437 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 NR0B2Q15466 257 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 CCDC70Q6NSX1 233 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 DARS2Q6PI48 645 aaKnown RBP15.31■□□□□ 0.04
CPSF1-210ENST00000532935 LVRNQ6Q4G3 990 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 ADAMTSL4Q6UY14 1074 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 GKN2Q86XP6 184 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 SCG3Q8WXD2 468 aaKnown RBP15.31■□□□□ 0.04
CPSF1-210ENST00000532935 GLMNQ92990 594 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 AGAP2Q99490 1192 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 FAM118BQ9BPY3 351 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 FERMT1Q9BQL6 677 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 RIOK2Q9BVS4 552 aaKnown RBP15.31■□□□□ 0.04
CPSF1-210ENST00000532935 FRMD8Q9BZ67 464 aaPredicted RBP15.31■□□□□ 0.04
CPSF1-210ENST00000532935 ZFYVE1Q9HBF4 777 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 MAGEE1Q9HCI5 957 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 PKD2L2Q9NZM6 624 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 RSPH14Q9UHP6 348 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 MOSPD1Q9UJG1 213 aa15.31■□□□□ 0.04
CPSF1-210ENST00000532935 RGSL1A5PLK6 1076 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 PROS1P07225 676 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 GP1BAP07359 652 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 CCDC175P0C221 793 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 CCZ1BP86790 482 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 CCZ1P86791 482 aaPredicted RBP15.3■□□□□ 0.04
CPSF1-210ENST00000532935 INSM1Q01101 510 aaPredicted RBP15.3■□□□□ 0.04
CPSF1-210ENST00000532935 HES3Q5TGS1 186 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 SLC35F3Q8IY50 421 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 COL27A1Q8IZC6 1860 aaPredicted RBP15.3■□□□□ 0.04
CPSF1-210ENST00000532935 IFI44Q8TCB0 444 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 EID2BQ96D98 161 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 OXNAD1Q96HP4 312 aaPredicted RBP15.3■□□□□ 0.04
CPSF1-210ENST00000532935 MRGPRX2Q96LB1 330 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 WDR24Q96S15 920 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 SRPK1Q96SB4 655 aaKnown RBP15.3■□□□□ 0.04
CPSF1-210ENST00000532935 TMEM168Q9H0V1 697 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 FAM83DQ9H4H8 585 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 CARS2Q9HA77 564 aaKnown RBP15.3■□□□□ 0.04
CPSF1-210ENST00000532935 SHOC2Q9UQ13 582 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 SLC17A4Q9Y2C5 497 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 ZNF711Q9Y462 761 aa15.3■□□□□ 0.04
CPSF1-210ENST00000532935 KMT2BQ9UMN6 2715 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-210ENST00000532935 LOC285095A0A1B0GVY8 99 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 CPED1A4D0V7 1026 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 EME2A4GXA9 379 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-210ENST00000532935 GOLGA6L9A6NEM1 432 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 KCNN4O15554 427 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 EPOP01588 193 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 SLC4A1P02730 911 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 FUCA1P04066 466 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms