RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TK2O00142 265 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 HAT1O14929 419 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 PER2O15055 1255 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 HCRTO43612 131 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ADAMTS4O75173 837 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 BCAS2O75934 225 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CST3P01034 146 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CHRNA1P02708 482 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 C8BP07358 591 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ITGALP20701 1170 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 TGM2P21980 687 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CRHR1P34998 444 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 RPL14P50914 215 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 TXNL4AP83876 142 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CDKL1Q00532 357 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CYP24A1Q07973 514 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 DMC1Q14565 340 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 TSC22D1Q15714 1073 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SMTNL2Q2TAL5 461 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 HABP4Q5JVS0 413 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 DHRS4L2Q6PKH6 230 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 MAP4K3Q8IVH8 894 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 COLGALT2Q8IYK4 626 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CCNYQ8ND76 341 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SETD9Q8NE22 299 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 C19orf18Q8NEA5 215 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 OR2T34Q8NGX1 318 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 OR2T3Q8NH03 318 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ADAMTS16Q8TE57 1224 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ASB12Q8WXK4 309 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CENPNQ96H22 339 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 ALPK1Q96QP1 1244 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 SLX1AQ9BQ83 275 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 CNPY3Q9BT09 278 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 TRIT1Q9H3H1 467 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 DYRK4Q9NR20 520 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 TBC1D13Q9NVG8 400 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 COQ3Q9NZJ6 369 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 BFARQ9NZS9 450 aa6.79□□□□□ -1.32
TGFBR3-209ENST00000532540 MYH4Q9Y623 1939 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 PPEF2O14830 753 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 PLD2O14939 933 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 PIGNO95427 931 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 RPL22P35268 128 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ARL2P36404 184 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ATP6V0D1P61421 351 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 TNK2Q07912 1038 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 IRF5Q13568 498 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ANGPT1Q15389 498 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 COLEC12Q5KU26 742 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ZNF362Q5T0B9 420 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 WSCD1Q658N2 575 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 HEATR6Q6AI08 1181 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ZNF773Q6PK81 442 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 TBC1D21Q8IYX1 336 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 CADM2Q8N3J6 435 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 CNTD1Q8N815 330 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 C12orf29Q8N999 325 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 TMCO6Q96DC7 493 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 NODALQ96S42 347 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 PHOX2BQ99453 314 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 NIFKQ9BYG3 293 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 WDR55Q9H6Y2 383 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 SPATA2Q9UM82 520 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 KCNE2Q9Y6J6 123 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 A0A1B0GUL6 1792 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 OR6C70A6NIJ9 312 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 MSI1O43347 362 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 FAM20BO75063 409 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 RNASEH2AO75792 299 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 SOAT2O75908 522 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ITGAVP06756 1048 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 PSKH1P11801 424 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ACO1P21399 889 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 AP3M2P53677 418 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 RAB25P57735 213 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 DSTNP60981 165 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 MBTD1Q05BQ5 628 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 OXA1LQ15070 435 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 DLG2Q15700 870 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 LSM12Q3MHD2 195 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 CTXN3Q4LDR2 81 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 RUNDC3AQ59EK9 446 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 RNASEH2BQ5TBB1 312 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 CYP4A22Q5TCH4 519 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 PLPP4Q5VZY2 271 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 CCBE1Q6UXH8 406 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 CHRDL2Q6WN34 429 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 SCML4Q8N228 414 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 CCDC185Q8N715 623 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 EMC1Q8N766 993 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 OR5H6Q8NGV6 325 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 SH3YL1Q96HL8 342 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ZNF512Q96ME7 567 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 NSMCE2Q96MF7 247 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 PAAF1Q9BRP4 392 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 PDZD7Q9H5P4 517 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ASNSD1Q9NWL6 643 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 ING4Q9UNL4 249 aa6.78□□□□□ -1.32
TGFBR3-209ENST00000532540 LAMA3Q16787 3333 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms