RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CA5BQ9Y2D0 317 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 NBPF19A0A087WUL8 3843 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 TMEM131Q92545 1883 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 PMS2P1A4D2B8 440 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 WASH4PA8MWX3 477 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 TLR4O00206 839 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 MCF2LO15068 1137 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 SIGLEC6O43699 453 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 RNF8O76064 485 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 IL1BP01584 269 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 CTSLP07711 333 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 MYBL1P10243 752 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 GOT1P17174 413 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 CKMT2P17540 419 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 CD38P28907 300 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 GKP32189 559 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 DRD3P35462 400 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 NNMTP40261 264 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 TMPRSS3P57727 454 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 NXPH1P58417 271 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PPP2CBP62714 309 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PPP2CAP67775 309 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 GABREP78334 506 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 KRT83P78385 493 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 NFKB2Q00653 900 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 RHDQ02161 417 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 POLD3Q15054 466 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 E2F5Q15329 346 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 SMTNL2Q2TAL5 461 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PPP6R3Q5H9R7 873 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ACBD5Q5T8D3 534 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZNF776Q68DI1 518 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PPP1R2P3Q6NXS1 205 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 KANSL1Q7Z3B3 1105 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 VPS36Q86VN1 386 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PHACTR4Q8IZ21 702 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 CHST14Q8NCH0 376 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZNF248Q8NDW4 579 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 OR2A12Q8NGT7 310 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 FNIP1Q8TF40 1166 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 RNF141Q8WVD5 230 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 RFFLQ8WZ73 363 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 CELF6Q96J87 481 aaKnown RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 EAF1Q96JC9 268 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 SERAC1Q96JX3 654 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PPP1R9BQ96SB3 815 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PABPC3Q9H361 631 aaKnown RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZWILCHQ9H900 591 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 MRPL47Q9HD33 250 aaKnown RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ETNK2Q9NVF9 386 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 CWC15Q9P013 229 aaKnown RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLC25A13Q9UJS0 675 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 TFR2Q9UP52 801 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 HS3ST2Q9Y278 367 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 MFHAS1Q9Y4C4 1052 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ANKRD36A6QL64 1941 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PLXNA2O75051 1894 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ARID1BQ8NFD5 2236 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 A0A1W2PNU3 283 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 SSU72P8A0A1W2PR75 194 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 CAPN8A6NHC0 703 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 AKR1B15C9JRZ8 316 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 J3KR12 359 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 MYO1FO00160 1098 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 KDELR3O43731 214 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 AKR1B10O60218 316 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PRPSAP2O60256 369 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 DFNA5O60443 496 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 USP12O75317 370 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 RNASEH2AO75792 299 aaKnown RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 CD48P09326 243 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 CDK4P11802 303 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ERCC2P18074 760 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 IL4RP24394 825 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 MAT2AP31153 395 aaKnown RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PCK1P35558 622 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PSMD8P48556 350 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 MAPKAPK2P49137 400 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 DNA2P51530 1060 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZNF75DP51815 510 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 AIF1P55008 147 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 CLCQ05315 142 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZBTB16Q05516 673 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 TRIM14Q14142 442 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 PIGHQ14442 188 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 TTC31Q49AM3 519 aaPredicted RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 HS1BP3Q53T59 392 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 COLEC12Q5KU26 742 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 ZNF783Q6ZMS7 281 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 DPY19L3Q6ZPD9 716 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 UMODL1-AS1Q8N2C9 162 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLC25A45Q8N413 288 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 RTL3Q8N8U3 475 aaKnown RBP7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 DCAF4L2Q8NA75 395 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 SLC35G2Q8TBE7 412 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 KCNE4Q8WWG9 221 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 HMCESQ96FZ2 354 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 MED8Q96G25 268 aa7.08□□□□□ -1.28
TRIM53CP-201ENST00000531490 WBP1Q96G27 269 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms