RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 RXRGP48443 463 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 LIMK1P53667 647 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 TERF1P54274 439 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 KIAA1024LP59773 190 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 CDH17Q12864 832 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 GPS1Q13098 491 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 DHX34Q14147 1143 aaKnown RBP14.42□□□□□ -0.1
CPSF1-206ENST00000531480 TRIP13Q15645 432 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-206ENST00000531480 TPRG1LQ5T0D9 272 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 ARMC3Q5W041 872 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 ADAMTSL4Q6UY14 1074 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 ZNF534Q76KX8 674 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 GLT6D1Q7Z4J2 308 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 TAB3Q8N5C8 712 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-206ENST00000531480 GPR26Q8NDV2 337 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 CPT1BQ92523 772 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 APOOQ9BUR5 198 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 GPR63Q9BZJ6 419 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 RRAGDQ9NQL2 400 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-206ENST00000531480 SNX11Q9Y5W9 270 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 MRFAP1Q9Y605 127 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.42□□□□□ -0.1
CPSF1-206ENST00000531480 PLXNB3Q9ULL4 1909 aa14.42□□□□□ -0.1
CPSF1-206ENST00000531480 CEP250Q9BV73 2442 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 MROH6A6NGR9 719 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 E7EVH7 732 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 AP3B1O00203 1094 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 BPIP17213 487 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 GRIA1P42261 906 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 ZNF140P52738 457 aaPredicted RBP14.41□□□□□ -0.1
CPSF1-206ENST00000531480 C21orf59P57076 290 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 BASP1P80723 227 aaKnown RBP14.41□□□□□ -0.1
CPSF1-206ENST00000531480 PDE1BQ01064 536 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 DR1Q01658 176 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 FZD2Q14332 565 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 HLA-BQ31612 363 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 ZDHHC20Q5W0Z9 365 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 DENND2CQ68D51 928 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 PDPK2PQ6A1A2 396 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 KDM7AQ6ZMT4 941 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 MACC1Q6ZN28 852 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 NAT8LQ8N9F0 302 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 MCUQ8NE86 351 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 OR52K1Q8NGK4 314 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 BLOC1S5Q8TDH9 187 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 SCAMP4Q969E2 229 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 FUBP1Q96AE4 644 aaKnown RBP14.41□□□□□ -0.1
CPSF1-206ENST00000531480 AP2M1Q96CW1 435 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 COX14Q96I36 57 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 RANBP9Q96S59 729 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 FAM83DQ9H4H8 585 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 FSCN3Q9NQT6 498 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 GDF3Q9NR23 364 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.41□□□□□ -0.1
CPSF1-206ENST00000531480 RIMKLBQ9ULI2 386 aa14.41□□□□□ -0.1
CPSF1-206ENST00000531480 ASCC3Q8N3C0 2202 aaKnown RBP14.41□□□□□ -0.1
CPSF1-206ENST00000531480 TCRBV7S3A2A0A539 114 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 H7C0S8 307 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 GAPDHSO14556 408 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 TMEM63AO94886 807 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 SLU7O95391 586 aaKnown RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 CRTAMO95727 393 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 CER1O95813 267 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 PCCBP05166 539 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 TUBBP07437 444 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 MLNP12872 115 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 LPOP22079 712 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 NFATC4Q14934 902 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 SHBQ15464 509 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 KCTD19Q17RG1 926 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 RSPO4Q2I0M5 234 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 RNASEH2BQ5TBB1 312 aaKnown RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 ANKRD22Q5VYY1 191 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 LRRC8BQ6P9F7 803 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 DBX2Q6ZNG2 339 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 PTAR1Q7Z6K3 402 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 JAMLQ86YT9 394 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 KLHL7Q8IXQ5 586 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 OXR1Q8N573 874 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 MINDY1Q8N5J2 469 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 PEX13Q92968 403 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 AGAP2Q99490 1192 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 ELF4Q99607 663 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 ZSCAN5AQ9BUG6 496 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 EDEM2Q9BV94 578 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 RIOK2Q9BVS4 552 aaKnown RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 IL26Q9NPH9 171 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 CD84Q9UIB8 345 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 CNOT6Q9ULM6 557 aaKnown RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 PNMA8BQ9ULN7 279 aaPredicted RBP14.4□□□□□ -0.1
CPSF1-206ENST00000531480 ARL5AQ9Y689 179 aa14.4□□□□□ -0.1
CPSF1-206ENST00000531480 A0A1B0GTQ1 180 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 C2orf81A6NN90 581 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 AGAP14A8MT82 685 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 FADS2P1A8MWK0 482 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 TNFRSF10CO14798 259 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 TP73O15350 636 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 YKT6O15498 198 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 PCDHGA12O60330 932 aa14.39□□□□□ -0.11
CPSF1-206ENST00000531480 GDF9O60383 454 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms