RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PCSK1NQ9UHG2 260 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 PRKAB1Q9Y478 270 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 ST14Q9Y5Y6 855 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 LRP4O75096 1905 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 ICE1Q9Y2F5 2266 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 A1L4Q6 167 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 CDC14CA4D256 554 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 INPP4BO15327 924 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 CALB1P05937 261 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 CYP2A6P11509 494 aaPredicted RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 NFKBIAP25963 317 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 VIPR1P32241 457 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 DLSTP36957 453 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 KLK7P49862 253 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 RENBPP51606 427 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 ZNF143P52747 638 aaPredicted RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 RPL7AP62424 266 aaKnown RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 GPLD1P80108 840 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 ITKQ08881 620 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 NSUN2Q08J23 767 aaKnown RBP eCLIP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 ABHD18Q0P651 414 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 NR1D2Q14995 579 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 CNGA3Q16281 694 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 PPP6R3Q5H9R7 873 aaPredicted RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 SMYD5Q6GMV2 418 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 TRIM72Q6ZMU5 477 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 CHST15Q7LFX5 561 aaPredicted RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 TRIM74Q86UV6 250 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 GALNT13Q8IUC8 556 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 LZTR1Q8N653 840 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 SLC37A2Q8TED4 501 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 AP2M1Q96CW1 435 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 ECHDC3Q96DC8 303 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 COQ10AQ96MF6 247 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 NSMCE3Q96MG7 304 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 MCEEQ96PE7 176 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 OR2M4Q96R27 311 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 NAA15Q9BXJ9 866 aaKnown RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 FRMD8Q9BZ67 464 aaPredicted RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 TRIT1Q9H3H1 467 aaKnown RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 STN1Q9H668 368 aaKnown RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 PRDM8Q9NQV8 689 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 FAM207AQ9NSI2 230 aaPredicted RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 SAMSN1Q9NSI8 373 aaKnown RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 NOCTQ9UK39 431 aaKnown RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 RPS6KL1Q9Y6S9 549 aa9.2□□□□□ -0.94
NEDD8-206ENST00000531430 SPTBN1Q01082 2364 aaKnown RBP9.2□□□□□ -0.94
NEDD8-206ENST00000531430 CACNA1DQ01668 2161 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 PIPSLA2A3N6 862 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 TMCO5BA8MYB1 307 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 HEXIM1O94992 359 aaKnown RBP9.19□□□□□ -0.94
NEDD8-206ENST00000531430 EML2O95834 649 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 CPP00450 1065 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 UNGP13051 313 aaPredicted RBP9.19□□□□□ -0.94
NEDD8-206ENST00000531430 ERCC2P18074 760 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 F8A1P23610 371 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 SOX5P35711 763 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 UQCRFS1P47985 274 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 SEPHS1P49903 392 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 IL10RBQ08334 325 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 SLC10A7Q0GE19 358 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 SQSTM1Q13501 440 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 BECN1Q14457 450 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 ZNF235Q14590 738 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 LBRQ14739 615 aaKnown RBP9.19□□□□□ -0.94
NEDD8-206ENST00000531430 CA9Q16790 459 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 RFLNAQ6ZTI6 216 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 TSPAN33Q86UF1 283 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 RASGRP3Q8IV61 690 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 CCDC13Q8IYE1 715 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 ESX1Q8N693 406 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 DTD2Q96FN9 168 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 ZPBPQ9BS86 351 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 CNPY3Q9BT09 278 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 ULBP3Q9BZM4 244 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 FBXO8Q9NRD0 319 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 KCTD5Q9NXV2 234 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 CNOT8Q9UFF9 292 aaKnown RBP9.19□□□□□ -0.94
NEDD8-206ENST00000531430 DACH1Q9UI36 760 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 TLK1Q9UKI8 766 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 PHTF1Q9UMS5 762 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 AP4E1Q9UPM8 1137 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 KCTD3Q9Y597 815 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 KCNMB2Q9Y691 235 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 RELNP78509 3460 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 MYO9AB2RTY4 2548 aa9.19□□□□□ -0.94
NEDD8-206ENST00000531430 CLEC18AA5D8T8 446 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 TRAFD1O14545 582 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-206ENST00000531430 ATP1A1P05023 1023 aaKnown RBP9.18□□□□□ -0.94
NEDD8-206ENST00000531430 IVLP07476 585 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 TPM2P07951 284 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 CCNYL3P0C7X3 344 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 TYRP1P17643 537 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 TNFAIP3P21580 790 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 PSMA2P25787 234 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 MAXP61244 160 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 AP1S1P61966 158 aa9.18□□□□□ -0.94
NEDD8-206ENST00000531430 HHEXQ03014 270 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms