RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 GRIK2Q13002 908 aa6□□□□□ -1.45
CASP4-208ENST00000530309 IKQ13123 557 aaPredicted RBP6□□□□□ -1.45
CASP4-208ENST00000530309 TOMM20Q15388 145 aa6□□□□□ -1.45
CASP4-208ENST00000530309 PCGF3Q3KNV8 242 aa6□□□□□ -1.45
CASP4-208ENST00000530309 EFHC1Q5JVL4 640 aa6□□□□□ -1.45
CASP4-208ENST00000530309 LRIF1Q5T3J3 769 aa6□□□□□ -1.45
CASP4-208ENST00000530309 CFAP77Q6ZQR2 320 aa6□□□□□ -1.45
CASP4-208ENST00000530309 C9orf47Q6ZRZ4 202 aa6□□□□□ -1.45
CASP4-208ENST00000530309 TAGAPQ8N103 731 aa6□□□□□ -1.45
CASP4-208ENST00000530309 HJURPQ8NCD3 748 aaPredicted RBP6□□□□□ -1.45
CASP4-208ENST00000530309 CCDC34Q96HJ3 373 aa6□□□□□ -1.45
CASP4-208ENST00000530309 KXD1Q9BQD3 176 aa6□□□□□ -1.45
CASP4-208ENST00000530309 C17orf75Q9HAS0 396 aa6□□□□□ -1.45
CASP4-208ENST00000530309 SUCLA2Q9P2R7 463 aaPredicted RBP6□□□□□ -1.45
CASP4-208ENST00000530309 SLC9A2Q9UBY0 812 aa6□□□□□ -1.45
CASP4-208ENST00000530309 NENFQ9UMX5 172 aa6□□□□□ -1.45
CASP4-208ENST00000530309 TMEM5Q9Y2B1 443 aa6□□□□□ -1.45
CASP4-208ENST00000530309 RABGAP1Q9Y3P9 1069 aa6□□□□□ -1.45
CASP4-208ENST00000530309 ACTN1P12814 892 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 UBA1P22314 1058 aaKnown RBP5.99□□□□□ -1.45
CASP4-208ENST00000530309 GCH1P30793 250 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 HOXA11P31270 313 aaPredicted RBP5.99□□□□□ -1.45
CASP4-208ENST00000530309 ACSL1P33121 698 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 SNX16P57768 344 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 LRMPQ12912 555 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 AMZ1Q400G9 498 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 FAM69BQ5VUD6 431 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 CRELD2Q6UXH1 353 aaPredicted RBP5.99□□□□□ -1.45
CASP4-208ENST00000530309 SLC36A4Q6YBV0 504 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 CLEC17AQ6ZS10 378 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 TSPAN33Q86UF1 283 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 FJX1Q86VR8 437 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 FOXRED2Q8IWF2 684 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 FAM216AQ8WUB2 273 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 RND1Q92730 232 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 FEM1CQ96JP0 617 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 ACSS1Q9NUB1 689 aaPredicted RBP5.99□□□□□ -1.45
CASP4-208ENST00000530309 PCDHGB4Q9UN71 923 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 CLIC4Q9Y696 253 aa5.99□□□□□ -1.45
CASP4-208ENST00000530309 SETD1BQ9UPS6 1966 aaKnown RBP5.98□□□□□ -1.45
CASP4-208ENST00000530309 A0A0U1RQJ8 604 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 hDV102S1A0JD36 115 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 ATP2A1O14983 1001 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 KCNJ13O60928 360 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 TPPPO94811 219 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 HIST1H2ABP04908 130 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 HIST1H2ADP20671 130 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 LMO1P25800 156 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 ACADLP28330 430 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 LINC00205P59089 165 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 CSNK2A1P68400 391 aaPredicted RBP5.98□□□□□ -1.45
CASP4-208ENST00000530309 PNLIPRP3Q17RR3 467 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 HIST3H2AQ7L7L0 130 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 CCDC89Q8N998 374 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 CSNK2A3Q8NEV1 391 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 OR8K5Q8NH50 307 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 WASF1Q92558 559 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 SAT2Q96F10 170 aaPredicted RBP5.98□□□□□ -1.45
CASP4-208ENST00000530309 NEUROD6Q96NK8 337 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 SRSF8Q9BRL6 282 aaKnown RBP5.98□□□□□ -1.45
CASP4-208ENST00000530309 MTMR10Q9NXD2 777 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 UBA2Q9UBT2 640 aaPredicted RBP5.98□□□□□ -1.45
CASP4-208ENST00000530309 TINAGQ9UJW2 476 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 FBXW11Q9UKB1 542 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 ACSL5Q9ULC5 683 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 SNX8Q9Y5X2 465 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 PCSK5Q92824 1860 aa5.98□□□□□ -1.45
CASP4-208ENST00000530309 LINC01553A4QN01 128 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 B4DLN1 442 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 H3BQ06 376 aaPredicted RBP5.97□□□□□ -1.45
CASP4-208ENST00000530309 PLRG1O43660 514 aaKnown RBP5.97□□□□□ -1.45
CASP4-208ENST00000530309 GAGE7O76087 117 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 GAGE12FP0CL80 117 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 GAGE12GP0CL81 117 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 GAGE12IP0CL82 117 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 ANXA7P20073 488 aaKnown RBP5.97□□□□□ -1.45
CASP4-208ENST00000530309 RRM1P23921 792 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 PON1P27169 355 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 BDKRB2P30411 391 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 MRPL12P52815 198 aaKnown RBP5.97□□□□□ -1.45
CASP4-208ENST00000530309 POLGP54098 1239 aaPredicted RBP5.97□□□□□ -1.45
CASP4-208ENST00000530309 HNRNPH2P55795 449 aaKnown RBP5.97□□□□□ -1.45
CASP4-208ENST00000530309 BNC1Q01954 994 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 GAGE1Q13065 139 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 GAGE4Q13068 117 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 PLCB4Q15147 1175 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 KCTD18Q6PI47 426 aaPredicted RBP5.97□□□□□ -1.45
CASP4-208ENST00000530309 ENOSF1Q7L5Y1 443 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 FBXL14Q8N1E6 418 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 CLIP4Q8N3C7 705 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 WFIKKN2Q8TEU8 576 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 NTPCRQ9BSD7 190 aaKnown RBP5.97□□□□□ -1.45
CASP4-208ENST00000530309 C1QTNF1Q9BXJ1 281 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 OR14J1Q9UGF5 321 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 CMAHPQ9Y471 501 aa5.97□□□□□ -1.45
CASP4-208ENST00000530309 ARHGEF40Q8TER5 1519 aa5.96□□□□□ -1.46
CASP4-208ENST00000530309 IGLV5-52A0A0A0MRZ9 124 aa5.96□□□□□ -1.46
CASP4-208ENST00000530309 M0QZ24 198 aa5.96□□□□□ -1.46
CASP4-208ENST00000530309 SOCS6O14544 535 aa5.96□□□□□ -1.46
CASP4-208ENST00000530309 OGG1O15527 345 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms