RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 UCHL3P15374 230 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 GM2AP17900 193 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 AP1S1P61966 158 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 HHEXQ03014 270 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 ZNF787Q6DD87 383 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 DOK6Q6PKX4 331 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 C6orf15Q6UXA7 325 aaPredicted RBP10.38□□□□□ -0.75
COPB1-207ENST00000529866 ZNF761Q86XN6 746 aaPredicted RBP10.38□□□□□ -0.75
COPB1-207ENST00000529866 LZTR1Q8N653 840 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 TSEN2Q8NCE0 465 aaKnown RBP10.38□□□□□ -0.75
COPB1-207ENST00000529866 EPS8L1Q8TE68 723 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 SLC37A2Q8TED4 501 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 SLC20A1Q8WUM9 679 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 SEC14L1Q92503 715 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 NCSTNQ92542 709 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 CENPIQ92674 756 aaPredicted RBP10.38□□□□□ -0.75
COPB1-207ENST00000529866 SH3KBP1Q96B97 665 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 STAMBPL1Q96FJ0 436 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 DTD2Q96FN9 168 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 SLC29A3Q9BZD2 475 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 TWSG1Q9GZX9 223 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 EPB41L1Q9H4G0 881 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 PDFQ9HBH1 243 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 APMAPQ9HDC9 416 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 CASS4Q9NQ75 786 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 LMBRD1Q9NUN5 540 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 KLHL3Q9UH77 587 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 CSMD1Q96PZ7 3565 aa10.38□□□□□ -0.75
COPB1-207ENST00000529866 CHD5Q8TDI0 1954 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 J3KR12 359 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 PSMD11O00231 422 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 TRAFD1O14545 582 aaPredicted RBP10.37□□□□□ -0.75
COPB1-207ENST00000529866 KATNA1O75449 491 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 HEXIM1O94992 359 aaKnown RBP10.37□□□□□ -0.75
COPB1-207ENST00000529866 FUCA1P04066 466 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 KRT3P12035 628 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 SLC2A4P14672 509 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 DESP17661 470 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 MMP8P22894 467 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 F8A1P23610 371 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 VARSP26640 1264 aaKnown RBP10.37□□□□□ -0.75
COPB1-207ENST00000529866 TNFRSF8P28908 595 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 CASP14P31944 242 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 VIPR1P32241 457 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 HTR7P34969 479 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 DCTP40126 519 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 MAPK9P45984 424 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 GPR1P46091 355 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 RGRP47804 291 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 RENBPP51606 427 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 PGDP52209 483 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 NDST2P52849 883 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 EPHA4P54764 986 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 AIF1P55008 147 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 RIPPLY3P57055 190 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 FOXM1Q08050 763 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 NSUN2Q08J23 767 aaKnown RBP eCLIP10.37□□□□□ -0.75
COPB1-207ENST00000529866 RFTN1Q14699 578 aaPredicted RBP10.37□□□□□ -0.75
COPB1-207ENST00000529866 CNGA3Q16281 694 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 TCP11X2Q5H9J9 407 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 CDKAL1Q5VV42 579 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 DENND2CQ68D51 928 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 SCYL2Q6P3W7 929 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 LYSMD3Q7Z3D4 306 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 ZNF677Q86XU0 584 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 TICAM1Q8IUC6 712 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 GALNT13Q8IUC8 556 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 PLXDC1Q8IUK5 500 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 APLFQ8IW19 511 aaPredicted RBP10.37□□□□□ -0.75
COPB1-207ENST00000529866 PYROXD2Q8N2H3 581 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 AVL9Q8NBF6 648 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 C11orf70Q9BRQ4 267 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.37□□□□□ -0.75
COPB1-207ENST00000529866 MAGEB5Q9BZ81 275 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 LRRC19Q9H756 370 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 SP110Q9HB58 689 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 SARS2Q9NP81 518 aaKnown RBP10.37□□□□□ -0.75
COPB1-207ENST00000529866 NOCTQ9UK39 431 aaKnown RBP10.37□□□□□ -0.75
COPB1-207ENST00000529866 MAP4K5Q9Y4K4 846 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 ESPL1Q14674 2120 aa10.37□□□□□ -0.75
COPB1-207ENST00000529866 ARHGEF17Q96PE2 2063 aaPredicted RBP10.37□□□□□ -0.75
COPB1-207ENST00000529866 CACNA1DQ01668 2161 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.36□□□□□ -0.75
COPB1-207ENST00000529866 PIPSLA2A3N6 862 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 ANKRD62A6NC57 917 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 PES1O00541 588 aaKnown RBP10.36□□□□□ -0.75
COPB1-207ENST00000529866 SOCS5O75159 536 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 LRCH4O75427 683 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 RECKO95980 971 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 PYGLP06737 847 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 ANKRD34CP0C6C1 535 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 CCNYL3P0C7X3 344 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 RNF224P0DH78 156 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 CYP2A6P11509 494 aaPredicted RBP10.36□□□□□ -0.75
COPB1-207ENST00000529866 CHRNB2P17787 502 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 GPD1P21695 349 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 ELAVL4P26378 380 aaKnown RBP10.36□□□□□ -0.75
COPB1-207ENST00000529866 ETV3P41162 512 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 POLD2P49005 469 aa10.36□□□□□ -0.75
COPB1-207ENST00000529866 SCNN1BP51168 640 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms