RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 HK3P52790 923 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 GDF10P55107 478 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 CDK3Q00526 305 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 SIX1Q15475 284 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 PARP6Q2NL67 630 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 PRRT3Q5FWE3 981 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 ZNF569Q5MCW4 686 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 ADAMTSL4Q6UY14 1074 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 RANBP10Q6VN20 620 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 NYAP1Q6ZVC0 841 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 RD3Q7Z3Z2 195 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 HEATR4Q86WZ0 1026 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 HID1Q8IV36 788 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 KLHDC8BQ8IXV7 354 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 SLC25A41Q8N5S1 370 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 OR56A4Q8NGH8 313 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 OR4C6Q8NH72 309 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 LMX1AQ8TE12 382 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 MAIP1Q8WWC4 291 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 C1orf54Q8WWF1 131 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 RTP4Q96DX8 246 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 CNDP2Q96KP4 475 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 PPP1R2P1Q96PQ5 205 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 AGAP2Q99490 1192 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 RIOK2Q9BVS4 552 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 FSD1LQ9BXM9 530 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 GPR63Q9BZJ6 419 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 FAM83DQ9H4H8 585 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 TOR4AQ9NXH8 423 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 GOLGA6AQ9NYA3 693 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 KLQ9UEF7 1012 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 FTSJ1Q9UET6 329 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 APOBEC3BQ9UH17 382 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 DGKBQ9Y6T7 804 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 AURKAO14965 403 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 FFAR2O15552 330 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 SIGLEC6O43699 453 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 METTL18O95568 372 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 TNFP01375 233 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 FGGP02679 453 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 FGF1P05230 155 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 CEACAM5P06731 702 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 FTH1P19P0C7X4 201 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 C1orf61Q13536 156 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 CCNG2Q16589 344 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 HENMT1Q5T8I9 393 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 KCTD16Q68DU8 428 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 DRICH1Q6PGQ1 229 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 ARHGEF18Q6ZSZ5 1173 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 SLCO6A1Q86UG4 719 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 OR1E3Q8WZA6 343 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 PBKQ96KB5 322 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 LRRC61Q9BV99 259 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 FICDQ9BVA6 458 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 FRMD8Q9BZ67 464 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 CDH19Q9H159 772 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 TRABDQ9H4I3 376 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 FGF22Q9HCT0 170 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 MRPL40Q9NQ50 206 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 RAD18Q9NS91 495 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 NLGN3Q9NZ94 848 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 HACD3Q9P035 362 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 ZNF148Q9UQR1 794 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 APOBEC2Q9Y235 224 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 ZKSCAN5Q9Y2L8 839 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 LRP4O75096 1905 aa12.62□□□□□ -0.39
CCDC90B-216ENST00000529856 LMO7DNF2Z398 122 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 TPP1O14773 563 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 KIF5CO60282 957 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 DKK1O94907 266 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 FUCA1P04066 466 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 ALPPL2P10696 532 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 CTSEP14091 401 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 CKMT2P17540 419 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 PMLP29590 882 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 HMGCLP35914 325 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 DCDC1P59894 354 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 CCDC173Q0VFZ6 552 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 SNX1Q13596 522 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 LONRF2Q1L5Z9 754 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 P3H1Q32P28 736 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 PROX2Q3B8N5 592 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 HS1BP3Q53T59 392 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 KCTD11Q693B1 232 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 SLC35F6Q8N357 371 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 SDR16C5Q8N3Y7 309 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 FSTL5Q8N475 847 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 TTC30BQ8N4P2 665 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 FAM181AQ8N9Y4 354 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 GPR26Q8NDV2 337 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 PDXPQ96GD0 296 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 COX14Q96I36 57 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 HIC2Q96JB3 615 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 DUSP23Q9BVJ7 150 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 CLPBQ9H078 707 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 ARNT2Q9HBZ2 717 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 CYP4F12Q9HCS2 524 aa12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 NFKBIL1Q9UBC1 381 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 CNOT6Q9ULM6 557 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-216ENST00000529856 PYCARDQ9ULZ3 195 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms