RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 QPCTQ16769 361 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 TFDP3Q5H9I0 405 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 HENMT1Q5T8I9 393 aaKnown RBP12.01□□□□□ -0.49
COPB1-206ENST00000529210 TAF8Q7Z7C8 310 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 NT5DC3Q86UY8 548 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 NRROSQ86YC3 692 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 KIAA1524Q8TCG1 905 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 RNF25Q96BH1 459 aaPredicted RBP12.01□□□□□ -0.49
COPB1-206ENST00000529210 AP2M1Q96CW1 435 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 LIN37Q96GY3 246 aaPredicted RBP12.01□□□□□ -0.49
COPB1-206ENST00000529210 HIC2Q96JB3 615 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 WDR24Q96S15 920 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 MLPHQ9BV36 600 aaPredicted RBP12.01□□□□□ -0.49
COPB1-206ENST00000529210 ADGRE3Q9BY15 652 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 GSDMCQ9BYG8 508 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 CDH19Q9H159 772 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 ASCL3Q9NQ33 180 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 RABGEF1Q9UJ41 708 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 PCDHA13Q9Y5I0 950 aa12.01□□□□□ -0.49
COPB1-206ENST00000529210 TMX2-CTNND1H3BSU7 103 aa12□□□□□ -0.49
COPB1-206ENST00000529210 ZRANB2O95218 330 aaKnown RBP eCLIP12□□□□□ -0.491e-7■■□□□ 13.1
COPB1-206ENST00000529210 CLDN7O95471 211 aa12□□□□□ -0.49
COPB1-206ENST00000529210 CCKBRP32239 447 aa12□□□□□ -0.49
COPB1-206ENST00000529210 GPR1P46091 355 aa12□□□□□ -0.49
COPB1-206ENST00000529210 SPINT3P49223 89 aa12□□□□□ -0.49
COPB1-206ENST00000529210 DCDC1P59894 354 aa12□□□□□ -0.49
COPB1-206ENST00000529210 AP1B1Q10567 949 aa12□□□□□ -0.49
COPB1-206ENST00000529210 ILF3Q12906 894 aaKnown RBP eCLIP12□□□□□ -0.49
COPB1-206ENST00000529210 EIF3IQ13347 325 aaKnown RBP12□□□□□ -0.49
COPB1-206ENST00000529210 SPIDRQ14159 915 aa12□□□□□ -0.49
COPB1-206ENST00000529210 SPA17Q15506 151 aa12□□□□□ -0.49
COPB1-206ENST00000529210 CLPPQ16740 277 aaPredicted RBP12□□□□□ -0.49
COPB1-206ENST00000529210 C14orf28Q4W4Y0 310 aa12□□□□□ -0.49
COPB1-206ENST00000529210 ODF2Q5BJF6 829 aa12□□□□□ -0.49
COPB1-206ENST00000529210 DENND2CQ68D51 928 aa12□□□□□ -0.49
COPB1-206ENST00000529210 NPNTQ6UXI9 565 aa12□□□□□ -0.49
COPB1-206ENST00000529210 SPOCD1Q6ZMY3 1216 aa12□□□□□ -0.49
COPB1-206ENST00000529210 RFLNAQ6ZTI6 216 aa12□□□□□ -0.49
COPB1-206ENST00000529210 ZNF438Q7Z4V0 828 aa12□□□□□ -0.49
COPB1-206ENST00000529210 RFX6Q8HWS3 928 aa12□□□□□ -0.49
COPB1-206ENST00000529210 TMTC1Q8IUR5 882 aa12□□□□□ -0.49
COPB1-206ENST00000529210 RCOR2Q8IZ40 523 aa12□□□□□ -0.49
COPB1-206ENST00000529210 FAM46DQ8NEK8 389 aa12□□□□□ -0.49
COPB1-206ENST00000529210 LPCAT1Q8NF37 534 aa12□□□□□ -0.49
COPB1-206ENST00000529210 EXD1Q8NHP7 514 aa12□□□□□ -0.49
COPB1-206ENST00000529210 CCL4L1Q8NHW4 92 aa12□□□□□ -0.49
COPB1-206ENST00000529210 LRRN4Q8WUT4 740 aa12□□□□□ -0.49
COPB1-206ENST00000529210 SCAMP4Q969E2 229 aa12□□□□□ -0.49
COPB1-206ENST00000529210 CCDC74AQ96AQ1 378 aa12□□□□□ -0.49
COPB1-206ENST00000529210 PRR11Q96HE9 360 aaPredicted RBP12□□□□□ -0.49
COPB1-206ENST00000529210 TEKT5Q96M29 485 aa12□□□□□ -0.49
COPB1-206ENST00000529210 SLC46A1Q96NT5 459 aa12□□□□□ -0.49
COPB1-206ENST00000529210 SRPK1Q96SB4 655 aaKnown RBP12□□□□□ -0.49
COPB1-206ENST00000529210 CARS2Q9HA77 564 aaKnown RBP12□□□□□ -0.49
COPB1-206ENST00000529210 MAGEE1Q9HCI5 957 aa12□□□□□ -0.49
COPB1-206ENST00000529210 VPS18Q9P253 973 aa12□□□□□ -0.49
COPB1-206ENST00000529210 GULP1Q9UBP9 304 aa12□□□□□ -0.49
COPB1-206ENST00000529210 SUFUQ9UMX1 484 aa12□□□□□ -0.49
COPB1-206ENST00000529210 EFR3BQ9Y2G0 817 aa12□□□□□ -0.49
COPB1-206ENST00000529210 TTLL3Q9Y4R7 772 aa12□□□□□ -0.49
COPB1-206ENST00000529210 ST14Q9Y5Y6 855 aa12□□□□□ -0.49
COPB1-206ENST00000529210 LOC400499M0QZD8 3231 aa12□□□□□ -0.49
COPB1-206ENST00000529210 ZFC3H1O60293 1989 aaKnown RBP11.99□□□□□ -0.49
COPB1-206ENST00000529210 PTPRQQ9UMZ3 2332 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 BPTFQ12830 3046 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 SMG1Q96Q15 3661 aaKnown RBP11.99□□□□□ -0.49
COPB1-206ENST00000529210 hCG_1818297A0A087WSY0 165 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 A0A0U1RQS6 177 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 C1orf232A0A0U1RR37 186 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 A0A1W2PNU3 283 aaPredicted RBP11.99□□□□□ -0.49
COPB1-206ENST00000529210 A0A1W2PQM1 296 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 HACD1B0YJ81 288 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 D6RAR5 112 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 RRP8O43159 456 aaKnown RBP11.99□□□□□ -0.49
COPB1-206ENST00000529210 CST8O60676 142 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 NDUFA10O95299 355 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 FGF1P05230 155 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 PTPN3P26045 913 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 ABCG1P45844 678 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 NOP2P46087 812 aaKnown RBP11.99□□□□□ -0.49
COPB1-206ENST00000529210 COPS2P61201 443 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 GABREP78334 506 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 CDK18Q07002 472 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 WASHC5Q12768 1159 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 LRP8Q14114 963 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 COL28A1Q2UY09 1125 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 PYCR3Q53H96 274 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 PDPK2PQ6A1A2 396 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 WDR36Q8NI36 951 aaKnown RBP11.99□□□□□ -0.49
COPB1-206ENST00000529210 CCHCR1Q8TD31 782 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 TFB1MQ8WVM0 346 aaKnown RBP11.99□□□□□ -0.49
COPB1-206ENST00000529210 EID2BQ96D98 161 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 RBM41Q96IZ5 413 aaKnown RBP11.99□□□□□ -0.49
COPB1-206ENST00000529210 SMIM14Q96QK8 99 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 VAT1Q99536 393 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 RBSNQ9H1K0 784 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 LRRN3Q9H3W5 708 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 RMI1Q9H9A7 625 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 GLOD4Q9HC38 313 aa11.99□□□□□ -0.49
COPB1-206ENST00000529210 RAD18Q9NS91 495 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms