RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 PHTF1Q9UMS5 762 aa7.72□□□□□ -1.17
SOX6-211ENST00000528429 FAM95CA0A1B0GW59 222 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 EPOPA6NHQ4 379 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 SNX3O60493 162 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 GLRA3O75311 464 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 GLRBP48167 497 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 SLC12A2P55011 1212 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 OVGP1Q12889 678 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 CBX3Q13185 183 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 CHI3L2Q15782 390 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 ZNF77Q15935 545 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 FUT11Q495W5 492 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 ASTLQ6HA08 431 aaPredicted RBP7.71□□□□□ -1.17
SOX6-211ENST00000528429 NLRP9Q7RTR0 991 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 NUDCD3Q8IVD9 361 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 TNS4Q8IZW8 715 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 PLD6Q8N2A8 252 aaKnown RBP7.71□□□□□ -1.17
SOX6-211ENST00000528429 SPATA6LQ8N4H0 392 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 OR4K2Q8NGD2 314 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 ACMSDQ8TDX5 336 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 FAM136AQ96C01 138 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 RANBP9Q96S59 729 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 BPIFA1Q9NP55 256 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 TUBA8Q9NY65 449 aaPredicted RBP7.71□□□□□ -1.17
SOX6-211ENST00000528429 TMEM216Q9P0N5 145 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 CRYL1Q9Y2S2 319 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 SNX5Q9Y5X3 404 aa7.71□□□□□ -1.17
SOX6-211ENST00000528429 EYSQ5T1H1 3165 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 MIA3Q5JRA6 1907 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 A0A1W2PQ67 120 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 CCDC162PA2VCL2 907 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 GOLGA8CPA6NN73 597 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 A8MX80 341 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 CRTAMO95727 393 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 GOT2P00505 430 aaKnown RBP7.71□□□□□ -1.18
SOX6-211ENST00000528429 ALPIP09923 528 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 DHRS4L1P0CG22 281 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 PABPC1P11940 636 aaKnown RBP7.71□□□□□ -1.18
SOX6-211ENST00000528429 CES1P23141 567 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 SP140Q13342 867 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 RBM20Q5T481 1227 aaKnown RBP7.71□□□□□ -1.18
SOX6-211ENST00000528429 NCEH1Q6PIU2 408 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 DGLUCYQ7Z3D6 616 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 CNTN4Q8IWV2 1026 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 SIX5Q8N196 739 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 C2CD4AQ8NCU7 369 aaPredicted RBP7.71□□□□□ -1.18
SOX6-211ENST00000528429 VN1R2Q8NFZ6 395 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 GOT1L1Q8NHS2 421 aaPredicted RBP7.71□□□□□ -1.18
SOX6-211ENST00000528429 CALML6Q8TD86 181 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 GLMNQ92990 594 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 ZFYVE19Q96K21 471 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 LRRC3BQ96PB8 259 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 FERD3LQ96RJ6 166 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 GPR22Q99680 433 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 YIPF3Q9GZM5 350 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 TBC1D14Q9P2M4 693 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 GGA2Q9UJY4 613 aa7.71□□□□□ -1.18
SOX6-211ENST00000528429 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.71□□□□□ -1.18
SOX6-211ENST00000528429 USP15Q9Y4E8 981 aaPredicted RBP7.71□□□□□ -1.18
SOX6-211ENST00000528429 ARPC4-TTLL3A0A0A6YYG9 625 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.7□□□□□ -1.18
SOX6-211ENST00000528429 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.7□□□□□ -1.18
SOX6-211ENST00000528429 ANKRD66B4E2M5 251 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 M0QX08 132 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 STK25O00506 426 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 SLC7A4O43246 635 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 RPP40O75818 363 aaKnown RBP7.7□□□□□ -1.18
SOX6-211ENST00000528429 PAPSS2O95340 614 aaPredicted RBP7.7□□□□□ -1.18
SOX6-211ENST00000528429 GLP2RO95838 553 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 IGSF6O95976 241 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 PRSS56P0CW18 603 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 NFKBIAP25963 317 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 PMLP29590 882 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 TAS2R39P59534 338 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 ROR2Q01974 943 aaKnown RBP7.7□□□□□ -1.18
SOX6-211ENST00000528429 SEMG2Q02383 582 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 BCL2L1Q07817 233 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 DUSP6Q16828 381 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 TAF1BQ53T94 588 aaPredicted RBP7.7□□□□□ -1.18
SOX6-211ENST00000528429 TCEAL5Q5H9L2 206 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 DGKKQ5KSL6 1271 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 ARMC4Q5T2S8 1044 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 ARMC12Q5T9G4 340 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 CGB2Q6NT52 195 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 OTOAQ7RTW8 1153 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 PIGWQ7Z7B1 504 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 CILP2Q8IUL8 1156 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 MFSD6LQ8IWD5 586 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 GALNT6Q8NCL4 622 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 MDGA1Q8NFP4 955 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 SORCS1Q8WY21 1168 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 MYO19Q96H55 970 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 TSNARE1Q96NA8 513 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 RBM14Q96PK6 669 aaKnown RBP7.7□□□□□ -1.18
SOX6-211ENST00000528429 NR1H4Q96RI1 486 aaPredicted RBP7.7□□□□□ -1.18
SOX6-211ENST00000528429 TSSK1BQ9BXA7 367 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 CIPCQ9C0C6 399 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 NPHS2Q9NP85 383 aa7.7□□□□□ -1.18
SOX6-211ENST00000528429 POLR3BQ9NW08 1133 aaPredicted RBP7.7□□□□□ -1.18
SOX6-211ENST00000528429 DCDC2Q9UHG0 476 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms