RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 NEUROG2Q9H2A3 272 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 MTG2Q9H4K7 406 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 POPDC2Q9HBU9 364 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 WDR6Q9NNW5 1121 aaKnown RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 PNPLA8Q9NP80 782 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 GDF3Q9NR23 364 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 ETNK2Q9NVF9 386 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 ARGLU1Q9NWB6 273 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.25□□□□□ -1.73
CD44-226ENST00000527889 UCKL1Q9NWZ5 548 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 DDIT4Q9NX09 232 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 OSER1Q9NX31 292 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.25□□□□□ -1.73
CD44-226ENST00000527889 MTRRQ9UBK8 725 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PCYOX1Q9UHG3 505 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 DNPEPQ9ULA0 475 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 FZD10Q9ULW2 581 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 STAP1Q9ULZ2 295 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PADI4Q9UM07 663 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 NFU1Q9UMS0 254 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 MAGED2Q9UNF1 606 aaPredicted RBP4.25□□□□□ -1.73
CD44-226ENST00000527889 WASF3Q9UPY6 502 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 SNX24Q9Y343 169 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PCDHB1Q9Y5F3 818 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 SLC4A7Q9Y6M7 1214 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 PI4KAP42356 2102 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 DNAH14Q0VDD8 3507 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 SDK1Q7Z5N4 2213 aa4.25□□□□□ -1.73
CD44-226ENST00000527889 XIRP2A4UGR9 3374 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 USP24Q9UPU5 2620 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 CCDC151A5D8V7 595 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 SLC38A8A6NNN8 435 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 GRXCR1A8MXD5 290 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FAM25EA8MYX2 175 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FAM72CH0Y354 149 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 H7C0C1 242 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 SLC16A6O15403 523 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 LIASO43766 372 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 MFSD11O43934 449 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 SNX2O60749 519 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 OPHN1O60890 802 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ERLIN1O75477 346 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FGF18O76093 207 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ENDOD1O94919 500 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 TJP3O95049 919 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 PAPLNO95428 1278 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 MOCS2O96007 188 aaPredicted RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 KRT14P02533 472 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 PRNPP04156 253 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 HMBSP08397 361 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 LINC00271P0C7V0 271 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 SPATA31D3P0C874 917 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 HSD3B1P14060 373 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ETS1P14921 441 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 TSHRP16473 764 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 GOT1P17174 413 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 IL4RP24394 825 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 YWHAQP27348 245 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 TNFRSF8P28908 595 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ECHS1P30084 290 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 STIP1P31948 543 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 CTNNB1P35222 781 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 RDXP35241 583 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 ATP6V1E1P36543 226 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 RPL21P46778 160 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 STT3AP46977 705 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ATP5OP48047 213 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FNTAP49354 379 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 HK3P52790 923 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 VCPP55072 806 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 EIF3EP60228 445 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 PLIN5Q00G26 463 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 MGAT2Q10469 447 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 EFEMP1Q12805 493 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 TAF10Q12962 218 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 MRPL28Q13084 256 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 PLD1Q13393 1074 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 DHX34Q14147 1143 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 PDK2Q15119 407 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 PPP1R7Q15435 360 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 SLC14A2Q15849 920 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 DPYSL2Q16555 572 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FAM153CQ494X1 144 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 BOLA3Q53S33 107 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ANKRD20A8PQ5CZ79 823 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 RALGPS1Q5JS13 557 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 C9orf50Q5SZB4 431 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 BEND6Q5SZJ8 279 aaPredicted RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 THEMIS2Q5TEJ8 643 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FAM72AQ5TYM5 149 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 PLPP4Q5VZY2 271 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 DUPD1Q68J44 220 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 SLC8B1Q6J4K2 584 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FAM72DQ6L9T8 149 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 PSRC1Q6PGN9 363 aaPredicted RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 TMCO3Q6UWJ1 677 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ZNF574Q6ZN55 896 aaPredicted RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 SPATA31D4Q6ZUB0 917 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 DENND5BQ6ZUT9 1274 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ZC3H18Q86VM9 953 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms