RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ACTL7AQ9Y615 435 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 ACOT8O14734 319 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 NDUFS3O75489 264 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 CXCL10P02778 98 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 F11P03951 625 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 PYGLP06737 847 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 LPOP22079 712 aaPredicted RBP15.31■□□□□ 0.04
USH1C-207ENST00000527720 PKNOX1P55347 436 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 PSME3P61289 254 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 RAD51Q06609 339 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 AGKQ53H12 422 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 SFT2D3Q587I9 215 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 TPGS2Q68CL5 300 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 OR52E8Q6IFG1 317 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 CYHR1Q6ZMK1 362 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 RYBPQ8N488 228 aaPredicted RBP15.31■□□□□ 0.04
USH1C-207ENST00000527720 NKAPQ8N5F7 415 aaKnown RBP15.31■□□□□ 0.04
USH1C-207ENST00000527720 MDGA1Q8NFP4 955 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 ASB9Q96DX5 294 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 NSMCE3Q96MG7 304 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 EBF3Q9H4W6 596 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 EPS15L1Q9UBC2 864 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 PCDHGA7Q9Y5G6 932 aa15.31■□□□□ 0.04
USH1C-207ENST00000527720 UBA6A0AVT1 1052 aaPredicted RBP15.3■□□□□ 0.04
USH1C-207ENST00000527720 SYCE1LA8MT33 242 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 UBXN8O00124 270 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 SRP72O76094 671 aaKnown RBP15.3■□□□□ 0.04
USH1C-207ENST00000527720 CDK14O94921 469 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 ABLIM3O94929 683 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 LATS1O95835 1130 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 LYNP07948 512 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 ALDH1A3P47895 512 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 TTPAP49638 278 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 STX1BP61266 288 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 SH3BP2P78314 561 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 MED21Q13503 144 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 PPP1R3AQ16821 1122 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 REP15Q6BDI9 236 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 CLEC6AQ6EIG7 209 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 SPNS2Q8IVW8 549 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 BHLHE22Q8NFJ8 381 aaPredicted RBP15.3■□□□□ 0.04
USH1C-207ENST00000527720 ZNF461Q8TAF7 563 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 USP13Q92995 863 aaPredicted RBP15.3■□□□□ 0.04
USH1C-207ENST00000527720 CREBZFQ9NS37 354 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 STOML2Q9UJZ1 356 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 PACSIN3Q9UKS6 424 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 TMCO1Q9UM00 188 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 MTF2Q9Y483 593 aaPredicted RBP15.3■□□□□ 0.04
USH1C-207ENST00000527720 RAI2Q9Y5P3 530 aa15.3■□□□□ 0.04
USH1C-207ENST00000527720 OAS3Q9Y6K5 1087 aaKnown RBP15.3■□□□□ 0.04
USH1C-207ENST00000527720 BBIP1A8MTZ0 92 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 H3BMM5 538 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 AZIN1O14977 448 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 PIM1P11309 404 aaPredicted RBP15.29■□□□□ 0.04
USH1C-207ENST00000527720 PRMT2P55345 433 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 MS4A2Q01362 244 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 PFKFB4Q16877 469 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 RARS2Q5T160 578 aaKnown RBP15.29■□□□□ 0.04
USH1C-207ENST00000527720 KANK2Q63ZY3 851 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 HERC6Q8IVU3 1022 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 ICA1LQ8NDH6 482 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 KLF16Q9BXK1 252 aaPredicted RBP15.29■□□□□ 0.04
USH1C-207ENST00000527720 CCDC167Q9P0B6 97 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 DNAJC15Q9Y5T4 150 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 COMMD10Q9Y6G5 202 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 OBSL1O75147 1896 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 ANKRD66B4E2M5 251 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 H7C0S8 307 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 CBX4O00257 560 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 FBP2O00757 339 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 NRP2O60462 931 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 SEC24AO95486 1093 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 GFAPP14136 432 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 RPL17P18621 184 aaKnown RBP15.29■□□□□ 0.04
USH1C-207ENST00000527720 FMO4P31512 558 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 SGSHP51688 502 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 CLCN4P51793 760 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 AQP4P55087 323 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 MRPS22P82650 360 aaKnown RBP15.29■□□□□ 0.04
USH1C-207ENST00000527720 TRAP1Q12931 704 aaKnown RBP15.29■□□□□ 0.04
USH1C-207ENST00000527720 ARHGEF6Q15052 776 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 LRRC36Q1X8D7 754 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 SETMARQ53H47 684 aaPredicted RBP15.29■□□□□ 0.04
USH1C-207ENST00000527720 INO80DQ53TQ3 878 aaPredicted RBP15.29■□□□□ 0.04
USH1C-207ENST00000527720 CXorf57Q6NSI4 855 aaKnown RBP15.29■□□□□ 0.04
USH1C-207ENST00000527720 KIAA1841Q6NSI8 718 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 PAQR3Q6TCH7 311 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 RIN3Q8TB24 985 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 PIP4K2CQ8TBX8 421 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 EXT2Q93063 718 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 ROPN1LQ96C74 230 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 IGSF21Q96ID5 467 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 LRGUKQ96M69 825 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 C1QTNF3Q9BXJ4 246 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 MUC3BQ9H195 1237 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 MID1IP1Q9NPA3 183 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 RNF112Q9ULX5 631 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 SUFUQ9UMX1 484 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 MED16Q9Y2X0 877 aa15.29■□□□□ 0.04
USH1C-207ENST00000527720 STX16-NPEPL1H3BU86 382 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms