RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SMARCAL1Q9NZC9 954 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 SARDHQ9UL12 918 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 TTC7AQ9ULT0 858 aaPredicted RBP10.97□□□□□ -0.65
NEDD8-204ENST00000526430 SNX12Q9UMY4 172 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 PCDHB11Q9Y5F2 797 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 HEY1Q9Y5J3 304 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 PDZD2O15018 2839 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 NF1P21359 2839 aa10.97□□□□□ -0.65
NEDD8-204ENST00000526430 TTC24A2A3L6 582 aaPredicted RBP10.96□□□□□ -0.65
NEDD8-204ENST00000526430 D6RAR5 112 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 MATN3O15232 486 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 JMJD7P0C870 316 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 PRLRP16471 622 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 ZFXP17010 805 aaPredicted RBP10.96□□□□□ -0.65
NEDD8-204ENST00000526430 HNRNPA2B1P22626 353 aaKnown RBP10.96□□□□□ -0.65
NEDD8-204ENST00000526430 AKT2P31751 481 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 SERPINB6P35237 376 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 NR2C2P49116 596 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 CLCN6P51797 869 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 ETF1P62495 437 aaKnown RBP10.96□□□□□ -0.65
NEDD8-204ENST00000526430 WASHC5Q12768 1159 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 ZBTB17Q13105 803 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 CARD16Q5EG05 197 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 FHL5Q5TD97 284 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 FAM46CQ5VWP2 391 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 C22orf39Q6P5X5 142 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 GCNT7Q6ZNI0 430 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 DPY19L3Q6ZPD9 716 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 Q6ZVU0 165 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 B3GNT8Q7Z7M8 397 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 CREG2Q8IUH2 290 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 ATP11CQ8NB49 1132 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 TSEN2Q8NCE0 465 aaKnown RBP10.96□□□□□ -0.65
NEDD8-204ENST00000526430 C9orf43Q8TAL5 461 aaPredicted RBP10.96□□□□□ -0.65
NEDD8-204ENST00000526430 ARRDC2Q8TBH0 407 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 GLMNQ92990 594 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 TMEM159Q96B96 161 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 HAUS1Q96CS2 278 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 PSKH2Q96QS6 385 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 OSBPL9Q96SU4 736 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 CCDC3Q9BQI4 270 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 CEP44Q9C0F1 390 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 EPB41L5Q9HCM4 733 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 CUEDC1Q9NWM3 386 aaPredicted RBP10.96□□□□□ -0.65
NEDD8-204ENST00000526430 PPM1HQ9ULR3 514 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 WASF2Q9Y6W5 498 aa10.96□□□□□ -0.65
NEDD8-204ENST00000526430 PRAMEF33A0A0G2JMD5 474 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 SPTY2D1-AS1A0A0U1RR47 76 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 ZSCAN5CA6NGD5 496 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 A6NNZ2 444 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 PDE2AO00408 941 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 MCF2LO15068 1137 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 CASC3O15234 703 aaKnown RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 SLC31A1O15431 190 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 AQP9O43315 295 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 PRAMEF10O60809 474 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 TJP3O95049 919 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 GKP32189 559 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 CD68P34810 354 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 CSNK1DP48730 415 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 TAS2R38P59533 333 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 IFI35P80217 286 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 CNTN1Q12860 1018 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 XRCC4Q13426 336 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 FZD2Q14332 565 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 LBRQ14739 615 aaKnown RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 PDK1Q15118 436 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 KCTD19Q17RG1 926 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 DEFB133Q30KQ1 61 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 ATXN7L2Q5T6C5 722 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 ALG1LQ6GMV1 187 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 ZC3H18Q86VM9 953 aaKnown RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 PARGQ86W56 976 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 SLC35F3Q8IY50 421 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 CCDC13Q8IYE1 715 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 PRELID2Q8N945 189 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 CASKIN2Q8WXE0 1202 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 P3H4Q92791 437 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 TMEM74Q96NL1 305 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 ZNF599Q96NL3 588 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 CATSPER2Q96P56 530 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 MYOCQ99972 504 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 ZNF768Q9H5H4 540 aaKnown RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 UBA2Q9UBT2 640 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 SLC25A13Q9UJS0 675 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 HPCAL4Q9UM19 191 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 ATP8A1Q9Y2Q0 1164 aa10.95□□□□□ -0.66
NEDD8-204ENST00000526430 ARHGEF17Q96PE2 2063 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-204ENST00000526430 KCNK1O00180 336 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 CES2O00748 559 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 ALOX15BO15296 676 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 CEP104O60308 925 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 FGGP02679 453 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 MMP2P08253 660 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 HGFP14210 728 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 CCNB1P14635 433 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 PTPN3P26045 913 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 RBL1P28749 1068 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 DCTP40126 519 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms