RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 CCNE2O96020 404 aa9.41□□□□□ -0.9
CTNND1-213ENST00000526357 S100A2P29034 98 aa9.41□□□□□ -0.9
CTNND1-213ENST00000526357 GNALP38405 381 aa9.41□□□□□ -0.9
CTNND1-213ENST00000526357 CDH8P55286 799 aa9.41□□□□□ -0.9
CTNND1-213ENST00000526357 RPP38P78345 283 aaKnown RBP9.41□□□□□ -0.9
CTNND1-213ENST00000526357 SULT2A1Q06520 285 aa9.41□□□□□ -0.9
CTNND1-213ENST00000526357 PSMD5Q16401 504 aa9.41□□□□□ -0.9
CTNND1-213ENST00000526357 NPNTQ6UXI9 565 aa9.41□□□□□ -0.9
CTNND1-213ENST00000526357 RFKQ969G6 155 aa9.41□□□□□ -0.9
CTNND1-213ENST00000526357 CITED4Q96RK1 184 aa9.41□□□□□ -0.9
CTNND1-213ENST00000526357 ZNF639Q9UID6 485 aa9.41□□□□□ -0.9
CTNND1-213ENST00000526357 MRPS23Q9Y3D9 190 aaKnown RBP9.41□□□□□ -0.9
CTNND1-213ENST00000526357 DDX3YO15523 660 aaKnown RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 SLC25A14O95258 325 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 ZBTB11O95625 1053 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 MASP1P48740 699 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 TSPAN5P62079 268 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 PCDH1Q08174 1060 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 CCNYL2Q5T2Q4 361 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 LRRC38Q5VT99 294 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 AMIGO2Q86SJ2 522 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 DNASE1L2Q92874 299 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 RCN3Q96D15 328 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 C12orf66Q96MD2 445 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 GORASP1Q9BQQ3 440 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 CORO1BQ9BR76 489 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 ABCB9Q9NP78 766 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 PDP1Q9P0J1 537 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 GULP1Q9UBP9 304 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 PCDHB9Q9Y5E1 797 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 LIASO43766 372 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 PSMA1P25786 263 aaKnown RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 ASMTP46597 345 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 EFR3AQ14156 821 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 POM121L1PQ3SYA9 428 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 SLC30A6Q6NXT4 461 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 FAM183BPQ6ZVS7 135 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 YTHDF3Q7Z739 585 aaKnown RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 TMEM199Q8N511 208 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 TTC29Q8NA56 475 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 PHC3Q8NDX5 983 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 ZNF548Q8NEK5 533 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 OR2T12Q8NG77 320 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 MTMR8Q96EF0 704 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 ERMAPQ96PL5 475 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 ABHD16BQ9H3Z7 469 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 NXF3Q9H4D5 531 aaKnown RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 EHD1Q9H4M9 534 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 CHST7Q9NS84 486 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 SPATA31E1Q6ZUB1 1445 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 SRRM3A6NNA2 597 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 FADS2P1A8MWK0 482 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 TLX3O43711 291 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 PAPSS2O95340 614 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 ADH1CP00326 375 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 ITGAVP06756 1048 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 UBA1P22314 1058 aaKnown RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 NR4A1P22736 598 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 MC4RP32245 332 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 MTHFRP42898 656 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 LIPEQ05469 1076 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 SCN1BQ07699 218 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 CPSF6Q16630 551 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 XKR4Q5GH76 650 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 FRMD7Q6ZUT3 714 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 OR8H1Q8NGG4 311 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 OR2AJ1Q8NGZ0 328 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 HELQQ8TDG4 1101 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 DHRS1Q96LJ7 313 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 ADAM2Q99965 735 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 IFT80Q9P2H3 777 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 AGO1Q9UL18 857 aaKnown RBP9.4□□□□□ -0.9
CTNND1-213ENST00000526357 RAB21Q9UL25 225 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 HPSEQ9Y251 543 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 ADCY10Q96PN6 1610 aa9.4□□□□□ -0.9
CTNND1-213ENST00000526357 FGF1P05230 155 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 ELFN1P0C7U0 828 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 ROR2Q01974 943 aaKnown RBP9.4□□□□□ -0.91
CTNND1-213ENST00000526357 PPATQ06203 517 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 RASGEF1BQ0VAM2 473 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 ABCA11PQ4W5N1 156 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 IQSEC1Q6DN90 963 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 AGAP11Q8TF27 550 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 HSFY1Q96LI6 401 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 SEMA3CQ99985 751 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 MLXQ9UH92 298 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 KRT36O76013 467 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 C22orf31O95567 290 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 CYP1A2P05177 515 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 LAMP2P13473 410 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 IGFBP5P24593 272 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 ABCG1P45844 678 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 CASP9P55211 416 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 ZNF234Q14588 700 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 SLC5A9Q2M3M2 681 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 POMZP3Q6PJE2 187 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 SCIMPQ6UWF3 145 aa9.4□□□□□ -0.91
CTNND1-213ENST00000526357 SLITRK4Q8IW52 837 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms