RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SEL1LQ9UBV2 794 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 DAPP1Q9UN19 280 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 PCDHA10Q9Y5I2 948 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 MGAMO43451 1857 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 NOTCH2Q04721 2471 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 SPEGQ15772 3267 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3DA0A087WVF3 549 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3IA0A087WXS9 549 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3EA0A087X179 549 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3KA0A087X1G2 549 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 A0A0U1RQJ8 604 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 ANO9A1A5B4 782 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 DENND3A2RUS2 1198 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 LINC01553A4QN01 128 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3BA6NDS4 549 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3FA6NER0 549 aaPredicted RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 FAM90A20PA6NIJ5 464 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 LOC730098B7Z3J9 87 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3LB9A6J9 549 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 C5orf67F2Z3F1 127 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 J3KR12 359 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 ATP2A1O14983 1001 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 CAND2O75155 1236 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 SOCS5O75159 536 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 DUSP11O75319 330 aaKnown RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 TMCC1O94876 653 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TNFRSF6BO95407 300 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 AFPP02771 609 aaKnown RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 RB1P06400 928 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 MYL3P08590 195 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 HMOX1P09601 288 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3HP0C7X1 549 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 FCGR2AP12318 317 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 ARSAP15289 507 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 CDH12P55289 794 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 KRTAP10-3P60369 221 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 IRX3P78415 501 aaPredicted RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 POU3F1Q03052 451 aaPredicted RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 TLE2Q04725 743 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 CHRNDQ07001 517 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 NEXNQ0ZGT2 675 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 GALNT1Q10472 559 aaPredicted RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 TRAF2Q12933 501 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 GCKRQ14397 625 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 KCTD2Q14681 263 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 SF3B4Q15427 424 aaKnown RBP eCLIP1.76□□□□□ -2.13
CD44-212ENST00000524922 ZNF528Q3MIS6 628 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 GALNTL6Q49A17 601 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 CAVIN4Q5BKX8 364 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TTC22Q5TAA0 569 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3GQ6DHY5 549 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3CQ6IPX1 549 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 LIN54Q6MZP7 749 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 KSR2Q6VAB6 950 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 ATF7IPQ6VMQ6 1270 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 MARK2Q7KZI7 788 aaKnown RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 RASGRP2Q7LDG7 609 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 SERPINA11Q86U17 422 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 WDR75Q8IWA0 830 aaKnown RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 TBC1D3Q8IZP1 549 aaPredicted RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 ANKRD13CQ8N6S4 541 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 LINS1Q8NG48 757 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 STYXQ8WUJ0 223 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 FAR1Q8WVX9 515 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 EID2BQ96D98 161 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 MRPL38Q96DV4 380 aaKnown RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 IGSF21Q96ID5 467 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 SGCZQ96LD1 299 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 GLT1D1Q96MS3 346 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 CDCA3Q99618 268 aaPredicted RBP1.76□□□□□ -2.13
CD44-212ENST00000524922 RTKNQ9BST9 563 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 RETREG1Q9H6L5 497 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 MYH16Q9H6N6 1097 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 HDAC6Q9UBN7 1215 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 RAP2CQ9Y3L5 183 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 ZHX2Q9Y6X8 837 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 CFAP46Q8IYW2 2715 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 MYO9BQ13459 2157 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 PTPRFP10586 1907 aa1.76□□□□□ -2.13
CD44-212ENST00000524922 FRMPD3Q5JV73 1810 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 KALRNO60229 2985 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 A0A1B0GUL6 1792 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 LRRK2Q5S007 2527 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 A0A0G2JMZ2 1700 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 IGLV5-37A0A075B6J1 123 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 ABHD14A-ACY1A0A1B0GW23 586 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 ANKRD18BA2A2Z9 1011 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 DYTNA2CJ06 578 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 C17orf102A2RUQ5 167 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 CPED1A4D0V7 1026 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 TMEM221A6NGB7 291 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 DDTLA6NHG4 134 aaPredicted RBP1.75□□□□□ -2.13
CD44-212ENST00000524922 PRAC2D3DTV9 90 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 M0R296 226 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 TIMM23O14925 209 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 ASAP2O43150 1006 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 GJB5O95377 273 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 HLA-DQA2P01906 255 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 CXCL10P02778 98 aa1.75□□□□□ -2.13
CD44-212ENST00000524922 ZNF853P0CG23 659 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms