RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 FBXO16Q8IX29 292 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 TBCKQ8TEA7 893 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 HMGB4Q8WW32 186 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 ASB5Q8WWX0 329 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 ATP2A3Q93084 1043 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 ZNF333Q96JL9 665 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 CDHR1Q96JP9 859 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 FAM20AQ96MK3 541 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 MBOAT7Q96N66 472 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 INPP4AQ96PE3 977 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 DEFB118Q96PH6 123 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 CRB3Q9BUF7 120 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 ISCUQ9H1K1 167 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 ZSCAN16Q9H4T2 348 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 SIRT3Q9NTG7 399 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 LIN7CQ9NUP9 197 aaKnown RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 TBC1D14Q9P2M4 693 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 ZHX1Q9UKY1 873 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 NOL7Q9UMY1 257 aaKnown RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 PCDHA7Q9UN72 937 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 Q9Y3F1 56 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 A0A087WV62 115 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 M0QYT0 321 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 IPO5O00410 1097 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 TNFRSF13BO14836 293 aaPredicted RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 CTAGE5O15320 804 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 DNPH1O43598 174 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 SLC37A4O43826 429 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 CCNT1O60563 726 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 ATP9AO75110 1047 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 NEURL1O76050 574 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 BAG4O95429 457 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 TDP2O95551 362 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 PGK1P00558 417 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 GH1P01241 217 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 HLA-DQA2P01906 255 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 CYP1A2P05177 515 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 NGFRP08138 427 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 UBA1P22314 1058 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 DDIT3P35638 169 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 CDK7P50613 346 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 NUCB2P80303 420 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 SETQ01105 290 aaPredicted RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 ROR2Q01974 943 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 EGR4Q05215 589 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 RNASELQ05823 741 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 ARHGAP1Q07960 439 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 BLMHQ13867 455 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 TRIM14Q14142 442 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 NEDD9Q14511 834 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 CELF3Q5SZQ8 465 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 ANO1Q5XXA6 986 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 ATL3Q6DD88 541 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 METTL7BQ6UX53 244 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 ANKS1BQ7Z6G8 1248 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 C4orf32Q8N8J7 132 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 ENDOVQ8N8Q3 282 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 EXD3Q8N9H8 876 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 SMRP1Q8NCR6 262 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 C7orf57Q8NEG2 295 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 KLHDC9Q8NEP7 349 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 OR6J1Q8NGC5 347 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 U2AF1L4Q8WU68 220 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 MCRS1Q96EZ8 462 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 ABHD8Q96I13 439 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 ZNF396Q96N95 335 aaPredicted RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 CAMK1GQ96NX5 476 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 RIT2Q99578 217 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 SDF4Q9BRK5 362 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 ZNF577Q9BSK1 485 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 UPF3AQ9H1J1 476 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 MYLK2Q9H1R3 596 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 KCNMB3Q9NPA1 279 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 TBC1D22BQ9NU19 505 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 IGSF9Q9P2J2 1179 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 DDX25Q9UHL0 483 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 DTX4Q9Y2E6 619 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 LRP12Q9Y561 859 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 COPG1Q9Y678 874 aaKnown RBP3.42□□□□□ -1.86
VPS13B-209ENST00000521559 NFASCO94856 1347 aa3.42□□□□□ -1.86
VPS13B-209ENST00000521559 RLFQ13129 1914 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 GSTTP1A0A1W2PQM5 241 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 TMEM247A6NEH6 219 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 CXorf65A6NEN9 183 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 OR6C75A6NL08 312 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 PRR23D1E9PI22 279 aaPredicted RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 LAD1O00515 517 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 MSH4O15457 936 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ASNA1O43681 348 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 NEMFO60524 1076 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 PSMD10O75832 226 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 CABYRO75952 493 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 GGPS1O95749 300 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 CCNE2O96020 404 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 TFRCP02786 760 aaKnown RBP3.41□□□□□ -1.86
VPS13B-209ENST00000521559 ITGA2BP08514 1039 aa3.41□□□□□ -1.86
VPS13B-209ENST00000521559 OR52Z1P0C646 297 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms