RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 SPOCD1Q6ZMY3 1216 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 NT5DC3Q86UY8 548 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 NRROSQ86YC3 692 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 TMTC1Q8IUR5 882 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 KATNAL2Q8IYT4 538 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 LSMEM2Q8N112 164 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 SNIP1Q8TAD8 396 aaKnown RBP16.99■□□□□ 0.31
SQLE-205ENST00000521232 HNRNPLLQ8WVV9 542 aaKnown RBP16.99■□□□□ 0.31
SQLE-205ENST00000521232 FGF11Q92914 225 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 TADA1Q96BN2 335 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 ADGRE3Q9BY15 652 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 SLC25A51Q9H1U9 297 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 GOLPH3Q9H4A6 298 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 GOLGA6AQ9NYA3 693 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 RABGEF1Q9UJ41 708 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 RALYQ9UKM9 306 aaKnown RBP16.99■□□□□ 0.31
SQLE-205ENST00000521232 SUFUQ9UMX1 484 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 ENTPD2Q9Y5L3 495 aa16.99■□□□□ 0.31
SQLE-205ENST00000521232 RGSL1A5PLK6 1076 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 CST8O60676 142 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 DXOO77932 396 aaKnown RBP16.98■□□□□ 0.31
SQLE-205ENST00000521232 ZRANB2O95218 330 aaKnown RBP eCLIP16.98■□□□□ 0.31
SQLE-205ENST00000521232 MPOP05164 745 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 IVLP07476 585 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 PNLIPP16233 465 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 GLB1P16278 677 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 ACTN2P35609 894 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 POLD2P49005 469 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 COL28A1Q2UY09 1125 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 TBC1D25Q3MII6 688 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 TFDP3Q5H9I0 405 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 FAM182AQ5T1J6 154 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 C11orf63Q6NUN7 778 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 RCOR2Q8IZ40 523 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 EXD1Q8NHP7 514 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 PTCD2Q8WV60 388 aaKnown RBP16.98■□□□□ 0.31
SQLE-205ENST00000521232 CCDC74AQ96AQ1 378 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 ZNF578Q96N58 590 aaPredicted RBP16.98■□□□□ 0.31
SQLE-205ENST00000521232 AGAP3Q96P47 875 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 TRIB3Q96RU7 358 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 WDR24Q96S15 920 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 AGAP2Q99490 1192 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 RIOK2Q9BVS4 552 aaKnown RBP16.98■□□□□ 0.31
SQLE-205ENST00000521232 GSDMCQ9BYG8 508 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 CEP41Q9BYV8 373 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 DPEP2Q9H4A9 486 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 POLR1BQ9H9Y6 1135 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 SAE1Q9UBE0 346 aaPredicted RBP16.98■□□□□ 0.31
SQLE-205ENST00000521232 APPL1Q9UKG1 709 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 LOC400499M0QZD8 3231 aa16.98■□□□□ 0.31
SQLE-205ENST00000521232 C1orf232A0A0U1RR37 186 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 NDUFA10O95299 355 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 GNPDA1P46926 289 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 SPINT3P49223 89 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 GABREP78334 506 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 ADCY2Q08462 1091 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 ILF3Q12906 894 aaKnown RBP eCLIP16.97■□□□□ 0.31
SQLE-205ENST00000521232 SPIDRQ14159 915 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 HLTFQ14527 1009 aaKnown RBP eCLIP16.97■□□□□ 0.31
SQLE-205ENST00000521232 PRKD1Q15139 912 aaPredicted RBP16.97■□□□□ 0.31
SQLE-205ENST00000521232 SLC14A2Q15849 920 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 C14orf28Q4W4Y0 310 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 CERCAMQ5T4B2 595 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 IGF2-ASQ6U949 168 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 B4GALNT4Q76KP1 1039 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 C17orf82Q86X59 251 aaPredicted RBP16.97■□□□□ 0.31
SQLE-205ENST00000521232 GAS2L3Q86XJ1 694 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 SFTPA2Q8IWL1 248 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 ATXN7L3BQ96GX2 97 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 COX14Q96I36 57 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 HIC2Q96JB3 615 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 CALR3Q96L12 384 aaKnown RBP16.97■□□□□ 0.31
SQLE-205ENST00000521232 TEKT5Q96M29 485 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 GLOD4Q9HC38 313 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 SPATS2LQ9NUQ6 558 aaKnown RBP16.97■□□□□ 0.31
SQLE-205ENST00000521232 SEPT10Q9P0V9 454 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 ST14Q9Y5Y6 855 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 IGSF10Q6WRI0 2623 aa16.97■□□□□ 0.31
SQLE-205ENST00000521232 BPTFQ12830 3046 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 hCG_1818297A0A087WSY0 165 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 A0A1W2PNU3 283 aaPredicted RBP16.96■□□□□ 0.31
SQLE-205ENST00000521232 A0A1W2PQM1 296 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 RCCD1A6NED2 376 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 SOWAHDA6NJG2 315 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 NUDT21O43809 227 aaKnown RBP16.96■□□□□ 0.31
SQLE-205ENST00000521232 FGF1P05230 155 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 PECAM1P16284 738 aaPredicted RBP16.96■□□□□ 0.31
SQLE-205ENST00000521232 PTPN3P26045 913 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 ADCY8P40145 1251 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 PDX1P52945 283 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 CCL7P80098 99 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 CTBSQ01459 385 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 CDK18Q07002 472 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 LLGL1Q15334 1064 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 KAZNQ674X7 775 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 KIAA1524Q8TCG1 905 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 CCHCR1Q8TD31 782 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 TFB1MQ8WVM0 346 aaKnown RBP16.96■□□□□ 0.31
SQLE-205ENST00000521232 P3H4Q92791 437 aa16.96■□□□□ 0.31
SQLE-205ENST00000521232 EID2BQ96D98 161 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms