RNA–Protein interactions for RNA: ENST00000521028.3

HOTTIP-203, HOXA distal transcript antisense RNA, humanhuman

TSL 5 BASIC

Gene HOTTIP, Length 3,345 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTTIP-203ENST00000521028 SNRPD2P62316 118 aaKnown RBP12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 IFITM3Q01628 133 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 NFYCQ13952 458 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 GAD1Q99259 594 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 HESX1Q9UBX0 185 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 ERVK-11Q9UQG0 969 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 FAM159BA6NKW6 160 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 BCAS1O75363 584 aaPredicted RBP12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 PMPCBO75439 489 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 ITKQ08881 620 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 GTF2H3Q13889 308 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 KCNMB4Q86W47 210 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 NIPA2Q8N8Q9 360 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 OR2T34Q8NGX1 318 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 OR6P1Q8NGX9 317 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 ZNF597Q96LX8 424 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 COPS4Q9BT78 406 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 FRMD8P1Q9BZ68 369 aaPredicted RBP12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 ABHD16BQ9H3Z7 469 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 RPF1Q9H9Y2 349 aaKnown RBP12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 ZBTB26Q9HCK0 441 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 PNPLA8Q9NP80 782 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 CACNA2D2Q9NY47 1150 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 PPP6CO00743 305 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 TMCC2O75069 709 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 FTH1P02794 183 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 SNRPB2P08579 225 aaKnown RBP12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 FKBP1BP68106 108 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 TNK2Q07912 1038 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 NSUN2Q08J23 767 aaKnown RBP eCLIP12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 ITIH5Q86UX2 942 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 SFRP1Q8N474 314 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 PCYOX1LQ8NBM8 494 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 HTR3CQ8WXA8 447 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 ASB9Q96DX5 294 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 PPM1MQ96MI6 270 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 SIK2Q9H0K1 926 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 PRMT7Q9NVM4 692 aaPredicted RBP12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 SLCO3A1Q9UIG8 710 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 GNPTGQ9UJJ9 305 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 PSME2Q9UL46 239 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 VPS4AQ9UN37 437 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 RAP2CQ9Y3L5 183 aa12.78□□□□□ -0.36
HOTTIP-203ENST00000521028 LRRC14BA6NHZ5 514 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 ZNF195O14628 629 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 B4GALT4O60513 344 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 ATP5BP06576 529 aaKnown RBP12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 LINC00032P0C843 101 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 GABRB3P28472 473 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 TNFAIP2Q03169 654 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 PRKAA1Q13131 559 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 PDK2Q15119 407 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 SLC10A6Q3KNW5 377 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 ARL13BQ3SXY8 428 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 WDR45BQ5MNZ6 344 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 UGT3A1Q6NUS8 523 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 ARHGAP36Q6ZRI8 547 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 CTU1Q7Z7A3 348 aaKnown RBP12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 ALDH16A1Q8IZ83 802 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 CNIH3Q8TBE1 160 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 TFAP2CQ92754 450 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 RNF34Q969K3 372 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 KCNA7Q96RP8 456 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 CDK5RAP1Q96SZ6 601 aaKnown RBP12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 FAM96AQ9H5X1 160 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 SMPD3Q9NY59 655 aaPredicted RBP12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 VANGL2Q9ULK5 521 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 MTF2Q9Y483 593 aaPredicted RBP12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 TIMM22Q9Y584 194 aa12.77□□□□□ -0.36
HOTTIP-203ENST00000521028 ARID1AO14497 2285 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 ACOT8O14734 319 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 TSPAN1O60635 241 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 LDLRP01130 860 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 GRM1Q13255 1194 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 CNSTQ6PJW8 725 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 TBPL2Q6SJ96 375 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 C4orf22Q6V702 233 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 CATSPER4Q7RTX7 472 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 NECAB2Q7Z6G3 386 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 XYLT1Q86Y38 959 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 CDKL3Q8IVW4 592 aaPredicted RBP12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 CMASQ8NFW8 434 aaPredicted RBP12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 OR6B3Q8NGW1 331 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 OSCP1Q8WVF1 389 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 PMEPA1Q969W9 287 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 SH3YL1Q96HL8 342 aaPredicted RBP12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 CSF3RQ99062 836 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 SMAD5Q99717 465 aaKnown RBP12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 EXOSC4Q9NPD3 245 aaKnown RBP12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 TBC1D13Q9NVG8 400 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 PAQR5Q9NXK6 330 aaPredicted RBP12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 SPEF1Q9Y4P9 236 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 ERI2A8K979 691 aaKnown RBP12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 GRID2O43424 1007 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 TRIM16O95361 564 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 CHRNB1P11230 501 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 SHMT2P34897 504 aa12.77□□□□□ -0.37
HOTTIP-203ENST00000521028 DGKEP52429 567 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms